RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 FAM178BQ8IXR5 827 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 XPO6Q96QU8 1125 aaKnown RBP10.36□□□□□ -0.75
UFD1-205ENST00000459854 MTA3Q9BTC8 594 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 GLIS2Q9BZE0 524 aaPredicted RBP10.36□□□□□ -0.75
UFD1-205ENST00000459854 FAM192AQ9GZU8 254 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 TMEM206Q9H813 350 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 SAMSN1Q9NSI8 373 aaKnown RBP10.36□□□□□ -0.75
UFD1-205ENST00000459854 ZHX2Q9Y6X8 837 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 BTBD18B2RXH4 712 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 TNNC2P02585 160 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 S100A5P33763 92 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 NUP107P57740 925 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 FKBP1BP68106 108 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 ORC2Q13416 577 aaPredicted RBP10.36□□□□□ -0.75
UFD1-205ENST00000459854 TAF1BQ53T94 588 aaPredicted RBP10.36□□□□□ -0.75
UFD1-205ENST00000459854 SLFN13Q68D06 897 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 ALKBH5Q6P6C2 394 aaKnown RBP10.36□□□□□ -0.75
UFD1-205ENST00000459854 CCDC80Q76M96 950 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 ARHGAP22Q7Z5H3 698 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 ADAT2Q7Z6V5 191 aaKnown RBP10.36□□□□□ -0.75
UFD1-205ENST00000459854 TEX12Q9BXU0 123 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 DNAJC17Q9NVM6 304 aaKnown RBP10.36□□□□□ -0.75
UFD1-205ENST00000459854 STMN3Q9NZ72 180 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 TBC1D7Q9P0N9 293 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 DNAJC6O75061 913 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 CARSP49589 748 aaKnown RBP10.36□□□□□ -0.75
UFD1-205ENST00000459854 INPP5AQ14642 412 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 APOA5Q6Q788 366 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 CAPN12Q6ZSI9 719 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 TUBGCP3Q96CW5 907 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 CDCA5Q96FF9 252 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 KDM4CQ9H3R0 1056 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 SLC39A2Q9NP94 309 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 PAPOLBQ9NRJ5 636 aaKnown RBP10.36□□□□□ -0.75
UFD1-205ENST00000459854 TUBA8Q9NY65 449 aaPredicted RBP10.36□□□□□ -0.75
UFD1-205ENST00000459854 L3MBTL1Q9Y468 752 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 SESN1Q9Y6P5 492 aa10.36□□□□□ -0.75
UFD1-205ENST00000459854 CFLARO15519 480 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 SFSWAPQ12872 951 aaKnown RBP10.35□□□□□ -0.75
UFD1-205ENST00000459854 GRIK5Q16478 980 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 C16orf86Q6ZW13 317 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 FASTKD5Q7L8L6 764 aaKnown RBP10.35□□□□□ -0.75
UFD1-205ENST00000459854 DGKHQ86XP1 1220 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 PNMA1Q8ND90 353 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 CYFIP2Q96F07 1278 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 ASCC2Q9H1I8 757 aaPredicted RBP10.35□□□□□ -0.75
UFD1-205ENST00000459854 L2HGDHQ9H9P8 463 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 MTO1Q9Y2Z2 717 aaKnown RBP10.35□□□□□ -0.75
UFD1-205ENST00000459854 WDR19Q8NEZ3 1342 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 MMP1P03956 469 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 EIF2S1P05198 315 aaKnown RBP10.35□□□□□ -0.75
UFD1-205ENST00000459854 NR2F2P24468 414 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 PPM1FP49593 454 aaPredicted RBP10.35□□□□□ -0.75
UFD1-205ENST00000459854 ZNF157P51786 506 aaPredicted RBP10.35□□□□□ -0.75
UFD1-205ENST00000459854 VSNL1P62760 191 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 GABPAQ06546 454 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 GPATCH4Q5T3I0 446 aaKnown RBP10.35□□□□□ -0.75
UFD1-205ENST00000459854 SETD3Q86TU7 594 aaPredicted RBP10.35□□□□□ -0.75
UFD1-205ENST00000459854 CLMNQ96JQ2 1002 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 TTC1Q99614 292 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 RANBP17Q9H2T7 1088 aaKnown RBP10.35□□□□□ -0.75
UFD1-205ENST00000459854 NMRK2Q9NPI5 230 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 QSER1Q2KHR3 1735 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 USP17L10C9JJH3 530 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 O00370 1275 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 KRT1P04264 644 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 CYP2J2P51589 502 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 IL1RL1Q01638 556 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 MORF4L2Q15014 288 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 NECTIN1Q15223 517 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 PTGISQ16647 500 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 SYCP2LQ5T4T6 812 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 PRAMEF18Q5VWM3 479 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 ADGRA1Q86SQ6 560 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 SLC51AQ86UW1 340 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 PAGE5Q96GU1 130 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 GPCPD1Q9NPB8 672 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 TBK1Q9UHD2 729 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 KLHL2O95198 593 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 CDH2P19022 906 aaPredicted RBP10.35□□□□□ -0.75
UFD1-205ENST00000459854 CXCR5P32302 372 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 KIF22Q14807 665 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 ADCK1Q86TW2 530 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 NEDD1Q8NHV4 660 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 DEPDC1BQ8WUY9 529 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 HESX1Q9UBX0 185 aa10.35□□□□□ -0.75
UFD1-205ENST00000459854 ZMYND8Q9ULU4 1186 aaPredicted RBP10.35□□□□□ -0.75
UFD1-205ENST00000459854 TNRC6CQ9HCJ0 1690 aaKnown RBP10.35□□□□□ -0.75
UFD1-205ENST00000459854 FAM196BA6NMK8 535 aa10.34□□□□□ -0.75
UFD1-205ENST00000459854 ADM5C9JUS6 153 aa10.34□□□□□ -0.75
UFD1-205ENST00000459854 MED7O43513 233 aa10.34□□□□□ -0.75
UFD1-205ENST00000459854 PALMO75781 387 aa10.34□□□□□ -0.75
UFD1-205ENST00000459854 AARSP49588 968 aaKnown RBP eCLIP10.34□□□□□ -0.75
UFD1-205ENST00000459854 RCAN1P53805 252 aa10.34□□□□□ -0.75
UFD1-205ENST00000459854 STX3Q13277 289 aa10.34□□□□□ -0.75
UFD1-205ENST00000459854 NBPF12Q5TAG4 269 aaPredicted RBP10.34□□□□□ -0.75
UFD1-205ENST00000459854 USP17L2Q6R6M4 530 aa10.34□□□□□ -0.75
UFD1-205ENST00000459854 PPM1KQ8N3J5 372 aa10.34□□□□□ -0.75
UFD1-205ENST00000459854 TTC16Q8NEE8 873 aa10.34□□□□□ -0.75
UFD1-205ENST00000459854 SLC26A7Q8TE54 656 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms