RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 THNSL1Q8IYQ7 743 aa15.4■□□□□ 0.06
TIMP1-205ENST00000456754 LRCH3Q96II8 777 aa15.4■□□□□ 0.06
TIMP1-205ENST00000456754 ZFP42Q96MM3 310 aa15.4■□□□□ 0.06
TIMP1-205ENST00000456754 CBWD1Q9BRT8 395 aa15.4■□□□□ 0.06
TIMP1-205ENST00000456754 TCHPQ9BT92 498 aa15.4■□□□□ 0.06
TIMP1-205ENST00000456754 TRAIPQ9BWF2 469 aa15.4■□□□□ 0.06
TIMP1-205ENST00000456754 NUP62CLQ9H1M0 184 aa15.4■□□□□ 0.06
TIMP1-205ENST00000456754 MTIF3Q9H2K0 278 aaKnown RBP15.4■□□□□ 0.06
TIMP1-205ENST00000456754 RC3H2Q9HBD1 1191 aaKnown RBP15.4■□□□□ 0.06
TIMP1-205ENST00000456754 TMEM161AQ9NX61 479 aa15.4■□□□□ 0.06
TIMP1-205ENST00000456754 MIOSQ9NXC5 875 aa15.4■□□□□ 0.06
TIMP1-205ENST00000456754 TMEM63CQ9P1W3 806 aa15.4■□□□□ 0.06
TIMP1-205ENST00000456754 LRFN2Q9ULH4 789 aa15.4■□□□□ 0.06
TIMP1-205ENST00000456754 PCDHB13Q9Y5F0 798 aa15.4■□□□□ 0.06
TIMP1-205ENST00000456754 GOLGA8IPA6NC78 632 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 GOLGA8JA6NMD2 632 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 CLIC2O15247 247 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 EIF3DO15371 548 aaKnown RBP eCLIP15.39■□□□□ 0.05
TIMP1-205ENST00000456754 TLL1O43897 1013 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 FAM189A1O60320 539 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 B4GALT3O60512 393 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 ZNF623O75123 536 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 TOM1L1O75674 476 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 SMC2O95347 1197 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 MATR3P43243 847 aaKnown RBP eCLIP15.39■□□□□ 0.05
TIMP1-205ENST00000456754 HTRA4P83105 476 aaPredicted RBP15.39■□□□□ 0.05
TIMP1-205ENST00000456754 NCBP1Q09161 790 aaKnown RBP15.39■□□□□ 0.05
TIMP1-205ENST00000456754 SYCP3Q8IZU3 236 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 PHOSPHO2Q8TCD6 241 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 HVCN1Q96D96 273 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 SAAL1Q96ER3 474 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 CCDC51Q96ER9 411 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 ZBED2Q9BTP6 218 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 TRIM6Q9C030 488 aaPredicted RBP15.39■□□□□ 0.05
TIMP1-205ENST00000456754 NKX2-4Q9H2Z4 354 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 PCIF1Q9H4Z3 704 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 KCNG1Q9UIX4 513 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 INPP5FQ9Y2H2 1132 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 ANK1P16157 1881 aa15.39■□□□□ 0.05
TIMP1-205ENST00000456754 CITO14578 2027 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.38■□□□□ 0.05
TIMP1-205ENST00000456754 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.38■□□□□ 0.05
TIMP1-205ENST00000456754 TBKBP1A7MCY6 615 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 OFD1O75665 1012 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 RECQL4O94761 1208 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 CA3P07451 260 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 ITGA4P13612 1032 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 MLH1P40692 756 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 PRCPP42785 496 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 RAB27AP51159 221 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 WNT7BP56706 349 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 MCL1Q07820 350 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 PSMD2Q13200 908 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 MORC3Q14149 939 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 NOLC1Q14978 699 aaKnown RBP eCLIP15.38■□□□□ 0.05
TIMP1-205ENST00000456754 BMT2Q1RMZ1 405 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 LRRC55Q6ZSA7 311 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 SLC17A8Q8NDX2 589 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 ZNF689Q96CS4 500 aaPredicted RBP15.38■□□□□ 0.05
TIMP1-205ENST00000456754 FAM84AQ96KN4 292 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 CASD1Q96PB1 797 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 GSDMAQ96QA5 445 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 YME1L1Q96TA2 773 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 GAD1Q99259 594 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 KCTD10Q9H3F6 313 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 ELAC1Q9H777 363 aaKnown RBP15.38■□□□□ 0.05
TIMP1-205ENST00000456754 KIAA1468Q9P260 1216 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 CACNG4Q9UBN1 327 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 PARP2Q9UGN5 583 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 PLAGL2Q9UPG8 496 aa15.38■□□□□ 0.05
TIMP1-205ENST00000456754 TDRD15B5MCY1 1934 aaKnown RBP15.37■□□□□ 0.05
TIMP1-205ENST00000456754 A0A0B4J269 797 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 CLDN3O15551 220 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 LINC00271P0C7V0 271 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 STAG3L1P0CL83 205 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 MCF2P10911 925 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 ACOT2P49753 483 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 PMS1P54277 932 aaKnown RBP15.37■□□□□ 0.05
TIMP1-205ENST00000456754 SPAG1Q07617 926 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 ALCAMQ13740 583 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 KNOP1Q1ED39 458 aaKnown RBP15.37■□□□□ 0.05
TIMP1-205ENST00000456754 DCAF4L1Q3SXM0 396 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 ZNF658Q5TYW1 1059 aaPredicted RBP15.37■□□□□ 0.05
TIMP1-205ENST00000456754 GSTCDQ8NEC7 633 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 NOC3LQ8WTT2 800 aaKnown RBP15.37■□□□□ 0.05
TIMP1-205ENST00000456754 POMGNT1Q8WZA1 660 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 CCDC34Q96HJ3 373 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 ADPGKQ9BRR6 497 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 MSTO1Q9BUK6 570 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 SEMA6BQ9H3T3 888 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 CERS4Q9HA82 394 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 RSAD1Q9HA92 442 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 AGPAT3Q9NRZ7 376 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 HOOK1Q9UJC3 728 aaKnown RBP15.37■□□□□ 0.05
TIMP1-205ENST00000456754 MRPL42Q9Y6G3 142 aaKnown RBP15.37■□□□□ 0.05
TIMP1-205ENST00000456754 STYXL1Q9Y6J8 313 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 PDCD11Q14690 1871 aaKnown RBP15.37■□□□□ 0.05
TIMP1-205ENST00000456754 NLRC5Q86WI3 1866 aa15.37■□□□□ 0.05
TIMP1-205ENST00000456754 TRIM49BA6NDI0 452 aa15.36■□□□□ 0.05
TIMP1-205ENST00000456754 ARL5CA6NH57 179 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms