RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TARSL2A2RTX5 802 aaKnown RBP12.71□□□□□ -0.37
VTA1-203ENST00000452973 P4HA2O15460 535 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 MCM3P25205 808 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 MFAP3P55082 362 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 WNT7BP56706 349 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 SNRPFP62306 86 aaKnown RBP12.71□□□□□ -0.37
VTA1-203ENST00000452973 MAP9Q49MG5 647 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 ZBTB41Q5SVQ8 909 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 ZNF771Q7L3S4 317 aaPredicted RBP12.71□□□□□ -0.37
VTA1-203ENST00000452973 NOP9Q86U38 636 aaKnown RBP12.71□□□□□ -0.37
VTA1-203ENST00000452973 LRRC71Q8N4P6 559 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 METTL13Q8N6R0 699 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 LMBR1Q8WVP7 490 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 HVCN1Q96D96 273 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 NT5C1BQ96P26 610 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 TCHPQ9BT92 498 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 NENFQ9UMX5 172 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 AGTPBP1Q9UPW5 1226 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 WDR81Q562E7 1941 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 SBF1O95248 1867 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 SPDYE5A6NIY4 337 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 CNMDO75829 334 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 MMEP08473 750 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 NEDD9Q14511 834 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 NAA35Q5VZE5 725 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 RFFLQ8WZ73 363 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 FAM212AQ96EL1 285 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 PORCNQ9H237 461 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 NRBP2Q9NSY0 501 aa12.71□□□□□ -0.37
VTA1-203ENST00000452973 AGO2Q9UKV8 859 aaKnown RBP12.71□□□□□ -0.37
VTA1-203ENST00000452973 BTNL10A8MVZ5 291 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 ATG7O95352 703 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 RFX1P22670 979 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 ANXA13P27216 316 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 GUCY2DQ02846 1103 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 GPS2Q13227 327 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 ZBTB33Q86T24 672 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 TRAPPC12Q8WVT3 735 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 SEPT1Q8WYJ6 367 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 MFSD14AQ96MC6 490 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 MMP19Q99542 508 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 SYT11Q9BT88 431 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 SELENOOQ9BVL4 669 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 DHX33Q9H6R0 707 aaKnown RBP12.71□□□□□ -0.38
VTA1-203ENST00000452973 STIM2Q9P246 746 aa12.71□□□□□ -0.38
VTA1-203ENST00000452973 CXCL11O14625 94 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 GLI1P08151 1106 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 TMEM253P0C7T8 217 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 TERF2Q15554 542 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 SPOPLQ6IQ16 392 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 SND1Q7KZF4 910 aaKnown RBP eCLIP12.7□□□□□ -0.38
VTA1-203ENST00000452973 USP37Q86T82 979 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 EPS8L1Q8TE68 723 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 PRPF31Q8WWY3 499 aaKnown RBP12.7□□□□□ -0.38
VTA1-203ENST00000452973 ZNF516Q92618 1163 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 PCDHB18PQ96TA0 734 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 EFCC1Q9HA90 598 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 EPB41L5Q9HCM4 733 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 AMFRQ9UKV5 643 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 COG5Q9UP83 839 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 TTLL13PA6NNM8 815 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 MAPK13O15264 365 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 HEXIM1O94992 359 aaKnown RBP12.7□□□□□ -0.38
VTA1-203ENST00000452973 SSTR3P32745 418 aaPredicted RBP12.7□□□□□ -0.38
VTA1-203ENST00000452973 GJC2Q5T442 439 aaPredicted RBP12.7□□□□□ -0.38
VTA1-203ENST00000452973 FAM160B1Q5W0V3 765 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 PHLDB2Q86SQ0 1253 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 NT5DC3Q86UY8 548 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 MSTO1Q9BUK6 570 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 HAPLN2Q9GZV7 340 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 PDGFCQ9NRA1 345 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 VPS18Q9P253 973 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 LCTP09848 1927 aa12.7□□□□□ -0.38
VTA1-203ENST00000452973 ANKRD62A6NC57 917 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 EDN1P05305 212 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 GJB1P08034 283 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 GARTP22102 1010 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 ZNF211Q13398 564 aaPredicted RBP12.69□□□□□ -0.38
VTA1-203ENST00000452973 TRADDQ15628 312 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 HSP90B2PQ58FF3 399 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 FMNL3Q8IVF7 1028 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 USP38Q8NB14 1042 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 HELQQ8TDG4 1101 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 RIN2Q8WYP3 895 aaPredicted RBP12.69□□□□□ -0.38
VTA1-203ENST00000452973 FBXL18Q96ME1 805 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 SPATA33Q96N06 139 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 INTUQ9ULD6 942 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 DICER1Q9UPY3 1922 aaKnown RBP12.69□□□□□ -0.38
VTA1-203ENST00000452973 WDR90Q96KV7 1748 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 PTPRFP10586 1907 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 EDNRBP24530 442 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 NAMPTP43490 491 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 RTP1P59025 263 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 GABPB1Q06547 395 aaPredicted RBP12.69□□□□□ -0.38
VTA1-203ENST00000452973 CAPSQ13938 189 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 METTL7BQ6UX53 244 aa12.69□□□□□ -0.38
VTA1-203ENST00000452973 ZNF572Q7Z3I7 529 aaPredicted RBP12.69□□□□□ -0.38
VTA1-203ENST00000452973 CDR2LQ86X02 465 aaPredicted RBP12.69□□□□□ -0.38
VTA1-203ENST00000452973 DHX37Q8IY37 1157 aaKnown RBP12.69□□□□□ -0.38
VTA1-203ENST00000452973 FAM71AQ8IYT1 594 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms