RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 SPATA6Q9NWH7 488 aaPredicted RBP7.35□□□□□ -1.23
PMS1-217ENST00000450931 ADAM28Q9UKQ2 775 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 PRG3Q9Y2Y8 225 aaPredicted RBP7.35□□□□□ -1.23
PMS1-217ENST00000450931 SF3B1O75533 1304 aaKnown RBP eCLIP7.35□□□□□ -1.235e-8■■■■■ 189.5
PMS1-217ENST00000450931 FOXD2O60548 495 aaPredicted RBP7.35□□□□□ -1.23
PMS1-217ENST00000450931 TSPAN1O60635 241 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 XYLBO75191 536 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 P4HBP07237 508 aaKnown RBP7.35□□□□□ -1.23
PMS1-217ENST00000450931 LAMTOR4Q0VGL1 99 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 TFDP1Q14186 410 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 MXD4Q14582 209 aaPredicted RBP7.35□□□□□ -1.23
PMS1-217ENST00000450931 NTRK3Q16288 839 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 LONRF3Q496Y0 759 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 LIN9Q5TKA1 542 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 OTUD6AQ7L8S5 288 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 TAS1R1Q7RTX1 841 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 KSR1Q8IVT5 923 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 C4orf19Q8IY42 314 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 PRPF31Q8WWY3 499 aaKnown RBP7.35□□□□□ -1.23
PMS1-217ENST00000450931 ATRIPQ8WXE1 791 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 PIK3R5Q8WYR1 880 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 DNASE1L2Q92874 299 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 KCNB2Q92953 911 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 FAM20AQ96MK3 541 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 FOXQ1Q9C009 403 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 LTB4R2Q9NPC1 389 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 AVENQ9NQS1 362 aaPredicted RBP7.35□□□□□ -1.23
PMS1-217ENST00000450931 CDV3Q9UKY7 258 aaKnown RBP7.35□□□□□ -1.23
PMS1-217ENST00000450931 PCDHA4Q9UN74 947 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 SMG5Q9UPR3 1016 aaKnown RBP7.35□□□□□ -1.23
PMS1-217ENST00000450931 MRPS17Q9Y2R5 130 aaKnown RBP7.35□□□□□ -1.23
PMS1-217ENST00000450931 COL4A2P08572 1712 aa7.35□□□□□ -1.23
PMS1-217ENST00000450931 TBX3O15119 743 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 ECI2O75521 394 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 GCFC2P16383 781 aaKnown RBP7.34□□□□□ -1.23
PMS1-217ENST00000450931 MLH1P40692 756 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 AFF1P51825 1210 aaKnown RBP7.34□□□□□ -1.23
PMS1-217ENST00000450931 ATXN1P54253 815 aaKnown RBP7.34□□□□□ -1.23
PMS1-217ENST00000450931 FGD1P98174 961 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 ELAVL2Q12926 359 aaKnown RBP7.34□□□□□ -1.23
PMS1-217ENST00000450931 UVSSAQ2YD98 709 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 SLC44A4Q53GD3 710 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 FERMT3Q86UX7 667 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 CEP170P1Q96L14 293 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 TMEM150BA6NC51 233 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 M0R2N6 131 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 SCNN1GP51170 649 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 NRLP54845 237 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 EVCP57679 992 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 NLRP5P59047 1200 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 PTENP60484 403 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 GPC5P78333 572 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 PPP2R5DQ14738 602 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 EMC2Q15006 297 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 BMP2KLQ5H9B9 411 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 PPM1LQ5SGD2 360 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 ZBTB41Q5SVQ8 909 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 DCLK2Q8N568 766 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 FGF14Q92915 247 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 GAD1Q99259 594 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 PHF20Q9BVI0 1012 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 MINDY3Q9H8M7 445 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 KCNMB3Q9NPA1 279 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 GMEB2Q9UKD1 530 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 VAV3Q9UKW4 847 aa7.34□□□□□ -1.23
PMS1-217ENST00000450931 TDP2O95551 362 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 ADRB1P08588 477 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 HSP90AA2PQ14568 343 aaPredicted RBP7.33□□□□□ -1.24
PMS1-217ENST00000450931 EPHA7Q15375 998 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 ADCK5Q3MIX3 580 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 PLA2G4FQ68DD2 849 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 PPP4R3AQ6IN85 833 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 PARM1Q6UWI2 310 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 KRT25Q7Z3Z0 450 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 PALB2Q86YC2 1186 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 TRIM22Q8IYM9 498 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 NETO1Q8TDF5 533 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 TCEANC2Q96MN5 208 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 MTRQ99707 1265 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 VPS54Q9P1Q0 977 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 DDX25Q9UHL0 483 aaKnown RBP7.33□□□□□ -1.24
PMS1-217ENST00000450931 GVINP1Q7Z2Y8 2422 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 SRGAP2CP0DJJ0 459 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 CSTF1Q05048 431 aaKnown RBP7.33□□□□□ -1.24
PMS1-217ENST00000450931 LAIR1Q6GTX8 287 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 SLC27A1Q6PCB7 646 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 Q6ZUG5 572 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 BLIDQ8IZY5 108 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 RNF149Q8NC42 400 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 FGF13Q92913 245 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 EIF2AQ9BY44 585 aaKnown RBP7.33□□□□□ -1.24
PMS1-217ENST00000450931 GPR62Q9BZJ7 368 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 TRIM6Q9C030 488 aaPredicted RBP7.33□□□□□ -1.24
PMS1-217ENST00000450931 GDE1Q9NZC3 331 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 NAP1L2Q9ULW6 460 aaPredicted RBP7.33□□□□□ -1.24
PMS1-217ENST00000450931 CFAP54Q96N23 3096 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 FAM170BA6NMN3 283 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 MAN2B1O00754 1011 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 LYPLA2O95372 231 aa7.33□□□□□ -1.24
PMS1-217ENST00000450931 DEXIO95424 95 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms