RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 TRPV1Q8NER1 839 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 INO80BQ9C086 356 aaPredicted RBP15.47■□□□□ 0.07
USP39-207ENST00000450066 TMEM8AQ9HCN3 771 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 COQ4Q9Y3A0 265 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 EVPLQ92817 2033 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 LCA5LO95447 670 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 SMIM10L2AP0DMW4 78 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 SMIM10L2BP0DMW5 78 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 CYBAP13498 195 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 EIF4A3P38919 411 aaKnown RBP15.47■□□□□ 0.07
USP39-207ENST00000450066 ACOT2P49753 483 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 PRKCZQ05513 592 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 ASIC2Q16515 512 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 FSCN1Q16658 493 aaKnown RBP15.47■□□□□ 0.07
USP39-207ENST00000450066 LMBR1Q8WVP7 490 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 MAP7D2Q96T17 732 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 POP1Q99575 1024 aaKnown RBP15.47■□□□□ 0.07
USP39-207ENST00000450066 STK33Q9BYT3 514 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 SETD4Q9NVD3 440 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 PRMT7Q9NVM4 692 aaPredicted RBP15.47■□□□□ 0.07
USP39-207ENST00000450066 PAXBP1Q9Y5B6 917 aa15.47■□□□□ 0.07
USP39-207ENST00000450066 CENPFP49454 3210 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 ZSWIM8A7E2V4 1837 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 HAS3O00219 553 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 DLATP10515 647 aaKnown RBP15.46■□□□□ 0.07
USP39-207ENST00000450066 PROZP22891 400 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 MCL1Q07820 350 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 PRPF4BQ13523 1007 aaKnown RBP15.46■□□□□ 0.07
USP39-207ENST00000450066 MFSD10Q14728 455 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 FAM187BQ17R55 369 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 ASTE1Q2TB18 679 aaPredicted RBP15.46■□□□□ 0.07
USP39-207ENST00000450066 NFRKBQ6P4R8 1299 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 GJB7Q6PEY0 223 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 IRF2BP2Q7Z5L9 587 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 KIAA0319LQ8IZA0 1049 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 TCHPQ9BT92 498 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 DEF6Q9H4E7 631 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 MINDY3Q9H8M7 445 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 LZTFL1Q9NQ48 299 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 RBAKQ9NYW8 714 aaPredicted RBP15.46■□□□□ 0.07
USP39-207ENST00000450066 DNAJC12Q9UKB3 198 aa15.46■□□□□ 0.07
USP39-207ENST00000450066 AJAP1Q9UKB5 411 aaPredicted RBP15.46■□□□□ 0.07
USP39-207ENST00000450066 BZW2Q9Y6E2 419 aaKnown RBP15.46■□□□□ 0.07
USP39-207ENST00000450066 A0A087WZ62 844 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 ABLIM1O14639 778 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 FAM189A1O60320 539 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 VTNP04004 478 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 KIF11P52732 1056 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 IRX5P78411 483 aaPredicted RBP15.45■□□□□ 0.06
USP39-207ENST00000450066 MAP2K1Q02750 393 aaPredicted RBP15.45■□□□□ 0.06
USP39-207ENST00000450066 SPA17Q15506 151 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 PHLDB3Q6NSJ2 640 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 ZNF662Q6ZS27 426 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 FMNL3Q8IVF7 1028 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 KIF18AQ8NI77 898 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 ZNF668Q96K58 619 aaPredicted RBP15.45■□□□□ 0.06
USP39-207ENST00000450066 FNBP1Q96RU3 617 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 FDXACB1Q9BRP7 624 aaPredicted RBP15.45■□□□□ 0.06
USP39-207ENST00000450066 KATNAL1Q9BW62 490 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 PTPRHQ9HD43 1115 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 R3HCC1Q9Y3T6 440 aaKnown RBP15.45■□□□□ 0.06
USP39-207ENST00000450066 MBLAC1A4D2B0 266 aaPredicted RBP15.45■□□□□ 0.06
USP39-207ENST00000450066 AKR1B10O60218 316 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 ZEB2O60315 1214 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 MYL3P08590 195 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 IQCF3P0C7M6 154 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 STAT1P42224 750 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 PSEN2P49810 448 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 CDC42EP1Q00587 391 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 BEX3Q00994 111 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 KLHL30Q0D2K2 578 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 ARHGAP29Q52LW3 1261 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 TDRD12Q587J7 1177 aaKnown RBP15.45■□□□□ 0.06
USP39-207ENST00000450066 ATF7IP2Q5U623 682 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 MPZL3Q6UWV2 235 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 SV2AQ7L0J3 742 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 FBXL13Q8NEE6 735 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 ZNF592Q92610 1267 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 VTI1AQ96AJ9 217 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 PRIMPOLQ96LW4 560 aa15.45■□□□□ 0.06
USP39-207ENST00000450066 A0A0U1RQJ8 604 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 F8VZ95 297 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 OGTO15294 1046 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 KPNA6O60684 536 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 MAP2K2P36507 400 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 PRKCIP41743 596 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 ARHGAP25P42331 645 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 GPC3P51654 580 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 GJA9P57773 515 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 CHMP4BP1P59074 171 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 ARID5AQ03989 594 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 ZBTB41Q5SVQ8 909 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 SYT10Q6XYQ8 523 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 C15orf39Q6ZRI6 1047 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 ZNF410Q86VK4 478 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 ATRIPQ8WXE1 791 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 HAUS4Q9H6D7 363 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 TOPORSQ9NS56 1045 aaPredicted RBP15.44■□□□□ 0.06
USP39-207ENST00000450066 TNFSF13BQ9Y275 285 aa15.44■□□□□ 0.06
USP39-207ENST00000450066 CASP8AP2Q9UKL3 1982 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms