RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 VCANP13611 3396 aa15.38■□□□□ 0.05
GTF3C3-206ENST00000448539 MEIS3P2A8K0S8 358 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 ACTN4O43707 911 aaKnown RBP15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 OFD1O75665 1012 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 TOM1L1O75674 476 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 GCNT3O95395 438 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 EDN1P05305 212 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 RB1P06400 928 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 LAG3P18627 525 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 IGFBP4P22692 258 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 COASYQ13057 564 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 ALCAMQ13740 583 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 CNNM4Q6P4Q7 775 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 MPZL3Q6UWV2 235 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 STXBP4Q6ZWJ1 553 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 ZNF720Q7Z2F6 126 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 SPRED2Q7Z698 418 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 ZBTB33Q86T24 672 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 KCNN1Q92952 543 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 PAGE5Q96GU1 130 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 FAM193BQ96PV7 902 aaPredicted RBP15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 C11orf84Q9BUA3 381 aaPredicted RBP15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 BLZF1Q9H2G9 400 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 GOLPH3LQ9H4A5 285 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 ST6GALNAC4Q9H4F1 302 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 OLFML3Q9NRN5 406 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 ANKFY1Q9P2R3 1169 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 EXOC7Q9UPT5 735 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 PCDHB13Q9Y5F0 798 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 TCHHQ07283 1943 aa15.37■□□□□ 0.05
GTF3C3-206ENST00000448539 FRMD3A2A2Y4 597 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 HNRNPDLO14979 420 aaKnown RBP15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 CLDN3O15551 220 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 GTPBP6O43824 516 aaPredicted RBP15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 ZNF202O95125 648 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 MCF2P10911 925 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 HARSP12081 509 aaKnown RBP15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 AKAP5P24588 427 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 GTF2BQ00403 316 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 ZC2HC1CQ53FD0 456 aaPredicted RBP15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 UNC13DQ70J99 1090 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 GRAMD1CQ8IYS0 662 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 HVCN1Q96D96 273 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 RPS6KC1Q96S38 1066 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 FIZ1Q96SL8 496 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 GAD1Q99259 594 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 CCDC94Q9BW85 323 aaPredicted RBP15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 PLVAPQ9BX97 442 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 CDT1Q9H211 546 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 MYH11P35749 1972 aa15.36■□□□□ 0.05
GTF3C3-206ENST00000448539 PVALEFA0A1B0GWK0 134 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 CARNS1A5YM72 827 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 ARL5CA6NH57 179 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 EPOPA6NHQ4 379 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 RFXAPO00287 272 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 MYL1P05976 194 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 MLH1P40692 756 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 YARSP54577 528 aaKnown RBP15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 GPM6BQ13491 265 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 CUL4BQ13620 913 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 NOLC1Q14978 699 aaKnown RBP eCLIP15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 KANK3Q6NY19 840 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 KRBA2Q6ZNG9 492 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 MAP4K3Q8IVH8 894 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 THNSL1Q8IYQ7 743 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 SYCP3Q8IZU3 236 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 GDPD5Q8WTR4 605 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 CCDC47Q96A33 483 aaKnown RBP15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 ZNF558Q96NG5 402 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 ACCSQ96QU6 501 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 COL25A1Q9BXS0 654 aaPredicted RBP15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 GBP3Q9H0R5 595 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 CWH43Q9H720 699 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 PTPRHQ9HD43 1115 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 TBC1D13Q9NVG8 400 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 SNTG2Q9NY99 539 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 KLK14Q9P0G3 267 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 GDAQ9Y2T3 454 aa15.35■□□□□ 0.05
GTF3C3-206ENST00000448539 SPTBN5Q9NRC6 3674 aaKnown RBP15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 C5orf67F2Z3F1 127 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 H3BNC9 293 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 ZC3H11AO75152 810 aaKnown RBP eCLIP15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 RECQL4O94761 1208 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 POMCP01189 267 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 PIGRP01833 764 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 MYBP10242 640 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 PROZP22891 400 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 CASP1P29466 404 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 PPM1AP35813 382 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 GRM5P41594 1212 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 ALDH7A1P49419 539 aaKnown RBP15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 OSTNP61366 133 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 PTPROQ16827 1216 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 FAM26FQ5R3K3 315 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 L1TD1Q5T7N2 865 aaKnown RBP15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 SLFN12LQ6IEE8 588 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 LRRC55Q6ZSA7 311 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 COLGALT1Q8NBJ5 622 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 P2RX5Q93086 422 aa15.34■□□□□ 0.05
GTF3C3-206ENST00000448539 ZBTB45Q96K62 511 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms