RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 OTUD6AQ7L8S5 288 aa13.84□□□□□ -0.19
SSR4-205ENST00000447375 DDX53Q86TM3 631 aaKnown RBP13.84□□□□□ -0.19
SSR4-205ENST00000447375 ECHDC2Q86YB7 292 aa13.84□□□□□ -0.19
SSR4-205ENST00000447375 ZNF710Q8N1W2 664 aa13.84□□□□□ -0.19
SSR4-205ENST00000447375 PJA1Q8NG27 643 aa13.84□□□□□ -0.19
SSR4-205ENST00000447375 NXPE3Q969Y0 559 aa13.84□□□□□ -0.19
SSR4-205ENST00000447375 FOXQ1Q9C009 403 aa13.84□□□□□ -0.19
SSR4-205ENST00000447375 SPATA6Q9NWH7 488 aaPredicted RBP13.84□□□□□ -0.19
SSR4-205ENST00000447375 FBXO4Q9UKT5 387 aa13.84□□□□□ -0.19
SSR4-205ENST00000447375 MTMR6Q9Y217 621 aa13.84□□□□□ -0.19
SSR4-205ENST00000447375 PPME1Q9Y570 386 aa13.84□□□□□ -0.19
SSR4-205ENST00000447375 MAP1BP46821 2468 aaKnown RBP13.84□□□□□ -0.19
SSR4-205ENST00000447375 ZBTB39O15060 712 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 LAMTOR5O43504 91 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 STX6O43752 255 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 LRRN2O75325 713 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 MAFO75444 373 aaPredicted RBP13.83□□□□□ -0.2
SSR4-205ENST00000447375 XRCC6P12956 609 aaKnown RBP eCLIP13.83□□□□□ -0.2
SSR4-205ENST00000447375 PDIA4P13667 645 aaKnown RBP13.83□□□□□ -0.2
SSR4-205ENST00000447375 TGM1P22735 817 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 CLCN3P51790 818 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 NPEPPSP55786 919 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 ATP2C1P98194 919 aaPredicted RBP13.83□□□□□ -0.2
SSR4-205ENST00000447375 ACAP1Q15027 740 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 IL17AQ16552 155 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 PLA2G4FQ68DD2 849 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 FERMT3Q86UX7 667 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 CATSPER3Q86XQ3 398 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 IGSF22Q8N9C0 903 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.2
SSR4-205ENST00000447375 ERMNQ8TAM6 284 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 HELQQ8TDG4 1101 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 STAMQ92783 540 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 SH2D3AQ9BRG2 576 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 POLR3CQ9BUI4 534 aaPredicted RBP13.83□□□□□ -0.2
SSR4-205ENST00000447375 TUFT1Q9NNX1 390 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 ANKEF1Q9NU02 776 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 EPS15L1Q9UBC2 864 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 SMG5Q9UPR3 1016 aaKnown RBP13.83□□□□□ -0.2
SSR4-205ENST00000447375 PCDHGA2Q9Y5H1 932 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 CHD6Q8TD26 2715 aa13.83□□□□□ -0.2
SSR4-205ENST00000447375 GPR32O75388 356 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 VTNP04004 478 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 HSP90AA1P07900 732 aaKnown RBP13.82□□□□□ -0.2
SSR4-205ENST00000447375 KLRC2P26717 231 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 RPA1P27694 616 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 CLCN4P51793 760 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 STARD6P59095 220 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 CSTF1Q05048 431 aaKnown RBP13.82□□□□□ -0.2
SSR4-205ENST00000447375 DMWDQ09019 674 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 RESTQ13127 1097 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 ARL6IP4Q66PJ3 421 aaKnown RBP13.82□□□□□ -0.2
SSR4-205ENST00000447375 DTHD1Q6ZMT9 781 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 TMEM173Q86WV6 379 aaPredicted RBP13.82□□□□□ -0.2
SSR4-205ENST00000447375 EXOC8Q8IYI6 725 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 LRRC71Q8N4P6 559 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 SHDQ96IW2 340 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 CEP170P1Q96L14 293 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 JPH2Q9BR39 696 aaPredicted RBP13.82□□□□□ -0.2
SSR4-205ENST00000447375 MRPL9Q9BYD2 267 aaKnown RBP13.82□□□□□ -0.2
SSR4-205ENST00000447375 BCO2Q9BYV7 579 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 RAB34Q9BZG1 259 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 ADAMTS10Q9H324 1103 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 DHX33Q9H6R0 707 aaKnown RBP13.82□□□□□ -0.2
SSR4-205ENST00000447375 WDR6Q9NNW5 1121 aaKnown RBP13.82□□□□□ -0.2
SSR4-205ENST00000447375 LRWD1Q9UFC0 647 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 STK24Q9Y6E0 443 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 SPTBN2O15020 2390 aa13.82□□□□□ -0.2
SSR4-205ENST00000447375 MED24O75448 989 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 MUTP22033 750 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 RFC5P40937 340 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 DNM2P50570 870 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 CDC42EP1Q00587 391 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 DRP2Q13474 957 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 XKR9Q5GH70 373 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 ZBTB44Q8NCP5 570 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 CMASQ8NFW8 434 aaPredicted RBP13.81□□□□□ -0.2
SSR4-205ENST00000447375 SLC7A3Q8WY07 619 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 IGSF21Q96ID5 467 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 KLHL5Q96PQ7 755 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 MYADMQ96S97 322 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 MAP7D2Q96T17 732 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 EMILIN2Q9BXX0 1053 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 EPC1Q9H2F5 836 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
SSR4-205ENST00000447375 ZSCAN32Q9NX65 697 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 GMEB2Q9UKD1 530 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 AKT3Q9Y243 479 aa13.81□□□□□ -0.2
SSR4-205ENST00000447375 CCDC195A0A1B0GUA6 201 aa13.8□□□□□ -0.2
SSR4-205ENST00000447375 SLC30A4O14863 429 aa13.8□□□□□ -0.2
SSR4-205ENST00000447375 TBC1D4O60343 1298 aa13.8□□□□□ -0.2
SSR4-205ENST00000447375 LILRB5O75023 590 aa13.8□□□□□ -0.2
SSR4-205ENST00000447375 ZC3H11AO75152 810 aaKnown RBP eCLIP13.8□□□□□ -0.2
SSR4-205ENST00000447375 BMP15O95972 392 aa13.8□□□□□ -0.2
SSR4-205ENST00000447375 HOXB3P14651 431 aaPredicted RBP13.8□□□□□ -0.2
SSR4-205ENST00000447375 RARRES1P49788 294 aa13.8□□□□□ -0.2
SSR4-205ENST00000447375 NLRP11P59045 1033 aaKnown RBP13.8□□□□□ -0.2
SSR4-205ENST00000447375 HAUS3Q68CZ6 603 aa13.8□□□□□ -0.2
SSR4-205ENST00000447375 NETO1Q8TDF5 533 aa13.8□□□□□ -0.2
SSR4-205ENST00000447375 PIGOQ8TEQ8 1089 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms