RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 ECM1Q16610 540 aa20.15■□□□□ 0.82
COL9A1-205ENST00000447041 PADI6Q6TGC4 694 aa20.15■□□□□ 0.82
COL9A1-205ENST00000447041 ZBTB33Q86T24 672 aa20.15■□□□□ 0.82
COL9A1-205ENST00000447041 ZBTB8OSQ8IWT0 167 aa20.15■□□□□ 0.82
COL9A1-205ENST00000447041 HACE1Q8IYU2 909 aa20.15■□□□□ 0.82
COL9A1-205ENST00000447041 C4orf32Q8N8J7 132 aa20.15■□□□□ 0.82
COL9A1-205ENST00000447041 ASIC4Q96FT7 647 aa20.15■□□□□ 0.82
COL9A1-205ENST00000447041 PRIMPOLQ96LW4 560 aa20.15■□□□□ 0.82
COL9A1-205ENST00000447041 SFXN1Q9H9B4 322 aa20.15■□□□□ 0.82
COL9A1-205ENST00000447041 PRMT7Q9NVM4 692 aaPredicted RBP20.15■□□□□ 0.82
COL9A1-205ENST00000447041 KLK14Q9P0G3 267 aa20.15■□□□□ 0.82
COL9A1-205ENST00000447041 ARHGEF35A5YM69 484 aa20.14■□□□□ 0.81
COL9A1-205ENST00000447041 SPDYE4A6NLX3 237 aa20.14■□□□□ 0.81
COL9A1-205ENST00000447041 HAUS3Q68CZ6 603 aa20.14■□□□□ 0.81
COL9A1-205ENST00000447041 FZD8Q9H461 694 aa20.14■□□□□ 0.81
COL9A1-205ENST00000447041 CACNG4Q9UBN1 327 aa20.14■□□□□ 0.81
COL9A1-205ENST00000447041 PARP2Q9UGN5 583 aa20.14■□□□□ 0.81
COL9A1-205ENST00000447041 NOL7Q9UMY1 257 aaKnown RBP20.14■□□□□ 0.81
COL9A1-205ENST00000447041 MUC6Q6W4X9 2439 aa20.14■□□□□ 0.81
COL9A1-205ENST00000447041 EDN1P05305 212 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 CENPBP07199 599 aaPredicted RBP20.13■□□□□ 0.81
COL9A1-205ENST00000447041 CYP11B2P19099 503 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 TRAPPC10P48553 1259 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 GLUD2P49448 558 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 FXR2P51116 673 aaKnown RBP eCLIP20.13■□□□□ 0.81
COL9A1-205ENST00000447041 GRIK3Q13003 919 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 FAM187BQ17R55 369 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 ATAT1Q5SQI0 421 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 TDRD5Q8NAT2 981 aaKnown RBP20.13■□□□□ 0.81
COL9A1-205ENST00000447041 KREMEN2Q8NCW0 462 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 RABGGTAQ92696 567 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 B3GALT6Q96L58 329 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 RPS6KC1Q96S38 1066 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 KCNH6Q9H252 994 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 PDZD7Q9H5P4 517 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 POLD4Q9HCU8 107 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 USP20Q9Y2K6 914 aa20.13■□□□□ 0.81
COL9A1-205ENST00000447041 ZMYM2Q9UBW7 1377 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 TEX28O15482 410 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 PRKCBP05771 671 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 LIG1P18858 919 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 CCT6AP40227 531 aaKnown RBP20.12■□□□□ 0.81
COL9A1-205ENST00000447041 TOB1P50616 345 aaPredicted RBP20.12■□□□□ 0.81
COL9A1-205ENST00000447041 NHLH1Q02575 133 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 KIAA0319Q5VV43 1072 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 GPR149Q86SP6 731 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 SUGP1Q8IWZ8 645 aaKnown RBP20.12■□□□□ 0.81
COL9A1-205ENST00000447041 KIFC3Q9BVG8 833 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 CCDC113Q9H0I3 377 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 C2orf40Q9H1Z8 148 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 SMOC2Q9H3U7 446 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 MAN1C1Q9NR34 630 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 LRWD1Q9UFC0 647 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 PCDHB6Q9Y5E3 794 aa20.12■□□□□ 0.81
COL9A1-205ENST00000447041 NR1I2O75469 434 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 BRD1O95696 1058 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 ASGR2P07307 311 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 MYBP10242 640 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 MUTP22033 750 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 U2AF2P26368 475 aaKnown RBP eCLIP20.11■□□□□ 0.81
COL9A1-205ENST00000447041 NAMPTP43490 491 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 DSG1Q02413 1049 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 PRPF4BQ13523 1007 aaKnown RBP20.11■□□□□ 0.81
COL9A1-205ENST00000447041 IER5LQ5T953 404 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 FUT10Q6P4F1 479 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 FBXL6Q8N531 539 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 PAAF1Q9BRP4 392 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 COLEC11Q9BWP8 271 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 GPR62Q9BZJ7 368 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 BHMT2Q9H2M3 363 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 SORCS3Q9UPU3 1222 aa20.11■□□□□ 0.81
COL9A1-205ENST00000447041 N4BP3O15049 544 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 PDGFBP01127 241 aaPredicted RBP20.1■□□□□ 0.81
COL9A1-205ENST00000447041 ADH1AP07327 375 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 PTGDRQ13258 359 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 MTMR3Q13615 1198 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 MAPK6Q16659 721 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 TMEM132AQ24JP5 1023 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 PRSS33Q8NF86 280 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 DEPTORQ8TB45 409 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 SNX29Q8TEQ0 813 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 CXCL16Q9H2A7 254 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 RXFP1Q9HBX9 757 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 CHST7Q9NS84 486 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 DDX19AQ9NUU7 478 aaKnown RBP20.1■□□□□ 0.81
COL9A1-205ENST00000447041 SNTG2Q9NY99 539 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 ADAM28Q9UKQ2 775 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 KIAA1024Q9UPX6 916 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 SSX2IPQ9Y2D8 614 aa20.1■□□□□ 0.81
COL9A1-205ENST00000447041 PP2D1A8MPX8 630 aa20.09■□□□□ 0.81
COL9A1-205ENST00000447041 PTGESO14684 152 aa20.09■□□□□ 0.81
COL9A1-205ENST00000447041 RECQL4O94761 1208 aa20.09■□□□□ 0.81
COL9A1-205ENST00000447041 GLUD1P00367 558 aa20.09■□□□□ 0.81
COL9A1-205ENST00000447041 VCPP55072 806 aaKnown RBP20.09■□□□□ 0.81
COL9A1-205ENST00000447041 EEF1DP3Q658K8 133 aa20.09■□□□□ 0.81
COL9A1-205ENST00000447041 CCDC149Q6ZUS6 474 aa20.09■□□□□ 0.81
COL9A1-205ENST00000447041 ALYREFQ86V81 257 aaKnown RBP20.09■□□□□ 0.81
COL9A1-205ENST00000447041 ZDHHC14Q8IZN3 488 aa20.09■□□□□ 0.81
COL9A1-205ENST00000447041 IGSF22Q8N9C0 903 aa20.09■□□□□ 0.81
COL9A1-205ENST00000447041 HASPINQ8TF76 798 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms