RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 SMARCE1Q969G3 411 aa15.43■□□□□ 0.06
SSBP3-208ENST00000444533 TGS1Q96RS0 853 aaKnown RBP15.43■□□□□ 0.06
SSBP3-208ENST00000444533 YBX2Q9Y2T7 364 aaKnown RBP15.43■□□□□ 0.06
SSBP3-208ENST00000444533 RANBP2P49792 3224 aaKnown RBP15.43■□□□□ 0.06
SSBP3-208ENST00000444533 PIGRP01833 764 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 MYBP10242 640 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 MYOGP15173 224 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 CASP1P29466 404 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 KMT5BQ4FZB7 885 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 HS2ST1Q7LGA3 356 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 TAS1R3Q7RTX0 852 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 ZNF598Q86UK7 904 aaKnown RBP15.42■□□□□ 0.06
SSBP3-208ENST00000444533 ELOA2Q8IYF1 753 aaPredicted RBP15.42■□□□□ 0.06
SSBP3-208ENST00000444533 POMGNT1Q8WZA1 660 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 LPPQ93052 612 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 ZNF689Q96CS4 500 aaPredicted RBP15.42■□□□□ 0.06
SSBP3-208ENST00000444533 LRCH3Q96II8 777 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 ACAP3Q96P50 834 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 FIZ1Q96SL8 496 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 NXF3Q9H4D5 531 aaKnown RBP15.42■□□□□ 0.06
SSBP3-208ENST00000444533 ZNF576Q9H609 170 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 SLC39A2Q9NP94 309 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 PCDHB12Q9Y5F1 795 aa15.42■□□□□ 0.06
SSBP3-208ENST00000444533 ZMYM2Q9UBW7 1377 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 SOX1O00570 391 aaPredicted RBP15.41■□□□□ 0.06
SSBP3-208ENST00000444533 LAG3P18627 525 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 MCL1Q07820 350 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 DPYDQ12882 1025 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 KCNB1Q14721 858 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 THNSL1Q8IYQ7 743 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 CRIPAKQ8N1N5 446 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 SMG8Q8ND04 991 aaKnown RBP15.41■□□□□ 0.06
SSBP3-208ENST00000444533 GOLGA5Q8TBA6 731 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 SP7Q8TDD2 431 aaPredicted RBP15.41■□□□□ 0.06
SSBP3-208ENST00000444533 GSDMAQ96QA5 445 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 MSTO1Q9BUK6 570 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 CDT1Q9H211 546 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 SNTG2Q9NY99 539 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 USP20Q9Y2K6 914 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 GDAQ9Y2T3 454 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 HES2Q9Y543 173 aa15.41■□□□□ 0.06
SSBP3-208ENST00000444533 LINC01553A4QN01 128 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 TTLL13PA6NNM8 815 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 KIAA0391O15091 583 aaKnown RBP15.4■□□□□ 0.06
SSBP3-208ENST00000444533 OFD1O75665 1012 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 PPP1R37O75864 691 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 PRPF6O94906 941 aaKnown RBP15.4■□□□□ 0.06
SSBP3-208ENST00000444533 RHOBTB3O94955 611 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 LDHAP00338 332 aaKnown RBP15.4■□□□□ 0.06
SSBP3-208ENST00000444533 ATF7P17544 494 aaPredicted RBP15.4■□□□□ 0.06
SSBP3-208ENST00000444533 PROZP22891 400 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 AKAP5P24588 427 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 CTNNB1P35222 781 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 MLH1P40692 756 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 GRM5P41594 1212 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 ALDH7A1P49419 539 aaKnown RBP15.4■□□□□ 0.06
SSBP3-208ENST00000444533 FXR1P51114 621 aaKnown RBP eCLIP15.4■□□□□ 0.06
SSBP3-208ENST00000444533 SNRPFP62306 86 aaKnown RBP15.4■□□□□ 0.06
SSBP3-208ENST00000444533 TAP1Q03518 808 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 PNOCQ13519 176 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 STIM1Q13586 685 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 EEF1DP3Q658K8 133 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 ARMCX5Q6P1M9 558 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 AGMOQ6ZNB7 445 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 CASD1Q96PB1 797 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 GBP3Q9H0R5 595 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 PTPRHQ9HD43 1115 aa15.4■□□□□ 0.06
SSBP3-208ENST00000444533 CGNQ9P2M7 1197 aaKnown RBP15.4■□□□□ 0.06
SSBP3-208ENST00000444533 LCHNA4D1U4 455 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 ARL5CA6NH57 179 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 TULP1O00294 542 aaPredicted RBP15.39■□□□□ 0.05
SSBP3-208ENST00000444533 OGTO15294 1046 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 RECQL4O94761 1208 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 EDN1P05305 212 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 RB1P06400 928 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 CLTAP09496 248 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 PRR29P0C7W0 189 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 PTMSP20962 102 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 PPM1AP35813 382 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 GATMP50440 423 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 CASP5P51878 434 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 OSTNP61366 133 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 CLLU1OSQ5K130 101 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 TMEM192Q8IY95 271 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 DEFB123Q8N688 67 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 FBXO22Q8NEZ5 403 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 ZNF507Q8TCN5 953 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 ARNTL2Q8WYA1 636 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 HPS3Q969F9 1004 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 GAD1Q99259 594 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 GAS2L1Q99501 681 aaPredicted RBP15.39■□□□□ 0.05
SSBP3-208ENST00000444533 C11orf84Q9BUA3 381 aaPredicted RBP15.39■□□□□ 0.05
SSBP3-208ENST00000444533 STRA6Q9BX79 667 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 PLVAPQ9BX97 442 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 RPF1Q9H9Y2 349 aaKnown RBP15.39■□□□□ 0.05
SSBP3-208ENST00000444533 TYW1Q9NV66 732 aaKnown RBP15.39■□□□□ 0.05
SSBP3-208ENST00000444533 AGO2Q9UKV8 859 aaKnown RBP15.39■□□□□ 0.05
SSBP3-208ENST00000444533 MTUS1Q9ULD2 1270 aa15.39■□□□□ 0.05
SSBP3-208ENST00000444533 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.39■□□□□ 0.05
SSBP3-208ENST00000444533 A0A0B4J269 797 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms