RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 SPRYD3Q8NCJ5 442 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 LINC00301Q8NCQ3 95 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 LARP4BQ92615 738 aaKnown RBP20.49■□□□□ 0.87
CCDC188-202ENST00000444532 ZFP42Q96MM3 310 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 CDCA3Q99618 268 aaPredicted RBP20.49■□□□□ 0.87
CCDC188-202ENST00000444532 ACO2Q99798 780 aaKnown RBP20.49■□□□□ 0.87
CCDC188-202ENST00000444532 TCF25Q9BQ70 676 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 MRPL4Q9BYD3 311 aaKnown RBP20.49■□□□□ 0.87
CCDC188-202ENST00000444532 TLE6Q9H808 572 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 ENTPD7Q9NQZ7 604 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 MIOSQ9NXC5 875 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 TFIP11Q9UBB9 837 aaKnown RBP20.49■□□□□ 0.87
CCDC188-202ENST00000444532 STK17AQ9UEE5 414 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 TNFSF13BQ9Y275 285 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 USP20Q9Y2K6 914 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 FAN1Q9Y2M0 1017 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 BRWD1Q9NSI6 2320 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 NPHP3-ACAD11A0A0J9YXS1 232 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 H0YCG3 227 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 SLC16A4O15374 487 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 B4GALT3O60512 393 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 F13A1P00488 732 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 SCP2P22307 547 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 GTF2F1P35269 517 aaKnown RBP eCLIP20.48■□□□□ 0.87
CCDC188-202ENST00000444532 LTBRP36941 435 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 NRIP1P48552 1158 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 SCNN1GP51170 649 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 DSC1Q08554 894 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 PUS10Q3MIT2 529 aaKnown RBP20.48■□□□□ 0.87
CCDC188-202ENST00000444532 RRAGBQ5VZM2 374 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 EEF1DP3Q658K8 133 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 EP400NLQ6ZTU2 488 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 TAS1R3Q7RTX0 852 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 COLGALT2Q8IYK4 626 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 TMEM161BQ8NDZ6 487 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 GSTCDQ8NEC7 633 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 REEP2Q9BRK0 252 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 PCDHGC5Q9Y5F6 944 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 XIRP2A4UGR9 3374 aa20.48■□□□□ 0.87
CCDC188-202ENST00000444532 NRP1O14786 923 aa20.47■□□□□ 0.87
CCDC188-202ENST00000444532 SPTLC2O15270 562 aa20.47■□□□□ 0.87
CCDC188-202ENST00000444532 PPP6R2O75170 966 aa20.47■□□□□ 0.87
CCDC188-202ENST00000444532 NR1I2O75469 434 aa20.47■□□□□ 0.87
CCDC188-202ENST00000444532 YEATS4O95619 227 aa20.47■□□□□ 0.87
CCDC188-202ENST00000444532 STRN3Q13033 797 aa20.47■□□□□ 0.87
CCDC188-202ENST00000444532 GIT2Q14161 759 aa20.47■□□□□ 0.87
CCDC188-202ENST00000444532 SMC1AQ14683 1233 aaKnown RBP20.47■□□□□ 0.87
CCDC188-202ENST00000444532 FOXD4L5Q5VV16 416 aaPredicted RBP20.47■□□□□ 0.87
CCDC188-202ENST00000444532 PLPP4Q5VZY2 271 aa20.47■□□□□ 0.87
CCDC188-202ENST00000444532 ATL3Q6DD88 541 aa20.47■□□□□ 0.87
CCDC188-202ENST00000444532 RBM23Q86U06 439 aaKnown RBP20.47■□□□□ 0.87
CCDC188-202ENST00000444532 TMEM173Q86WV6 379 aaPredicted RBP20.47■□□□□ 0.87
CCDC188-202ENST00000444532 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.47■□□□□ 0.87
CCDC188-202ENST00000444532 ADAMTS19Q8TE59 1207 aa20.47■□□□□ 0.87
CCDC188-202ENST00000444532 FOXD4L4Q8WXT5 416 aaPredicted RBP20.47■□□□□ 0.87
CCDC188-202ENST00000444532 KCNN1Q92952 543 aa20.47■□□□□ 0.87
CCDC188-202ENST00000444532 SNTG2Q9NY99 539 aa20.47■□□□□ 0.87
CCDC188-202ENST00000444532 KLK14Q9P0G3 267 aa20.47■□□□□ 0.87
CCDC188-202ENST00000444532 TCF20Q9UGU0 1960 aaKnown RBP20.46■□□□□ 0.87
CCDC188-202ENST00000444532 KRT18P05783 430 aaKnown RBP20.46■□□□□ 0.87
CCDC188-202ENST00000444532 MAPTP10636 758 aaKnown RBP20.46■□□□□ 0.87
CCDC188-202ENST00000444532 ZNF131P52739 623 aa20.46■□□□□ 0.87
CCDC188-202ENST00000444532 CACNB1Q02641 598 aaPredicted RBP20.46■□□□□ 0.87
CCDC188-202ENST00000444532 GRIK3Q13003 919 aa20.46■□□□□ 0.87
CCDC188-202ENST00000444532 DUSP6Q16828 381 aa20.46■□□□□ 0.87
CCDC188-202ENST00000444532 CCDC73Q6ZRK6 1079 aa20.46■□□□□ 0.87
CCDC188-202ENST00000444532 VPS52Q8N1B4 723 aa20.46■□□□□ 0.87
CCDC188-202ENST00000444532 MRPL43Q8N983 215 aaKnown RBP20.46■□□□□ 0.87
CCDC188-202ENST00000444532 RPS6KC1Q96S38 1066 aa20.46■□□□□ 0.87
CCDC188-202ENST00000444532 PTPRHQ9HD43 1115 aa20.46■□□□□ 0.87
CCDC188-202ENST00000444532 H3BQ06 376 aaPredicted RBP20.45■□□□□ 0.86
CCDC188-202ENST00000444532 LINC01565O15544 149 aa20.45■□□□□ 0.86
CCDC188-202ENST00000444532 RECQL4O94761 1208 aa20.45■□□□□ 0.86
CCDC188-202ENST00000444532 FAM13AO94988 1023 aa20.45■□□□□ 0.86
CCDC188-202ENST00000444532 CXCL14O95715 111 aa20.45■□□□□ 0.86
CCDC188-202ENST00000444532 OR1G1P47890 313 aa20.45■□□□□ 0.86
CCDC188-202ENST00000444532 NCKAP1LP55160 1127 aa20.45■□□□□ 0.86
CCDC188-202ENST00000444532 MYCT1Q8N699 235 aa20.45■□□□□ 0.86
CCDC188-202ENST00000444532 BCL7CQ8WUZ0 217 aaPredicted RBP20.45■□□□□ 0.86
CCDC188-202ENST00000444532 TARS2Q9BW92 718 aaKnown RBP20.45■□□□□ 0.86
CCDC188-202ENST00000444532 ZBP1Q9H171 429 aa20.45■□□□□ 0.86
CCDC188-202ENST00000444532 PARVGQ9HBI0 331 aa20.45■□□□□ 0.86
CCDC188-202ENST00000444532 HIDE1A8MVS5 230 aa20.44■□□□□ 0.86
CCDC188-202ENST00000444532 PER2O15055 1255 aa20.44■□□□□ 0.86
CCDC188-202ENST00000444532 CTSAP10619 480 aa20.44■□□□□ 0.86
CCDC188-202ENST00000444532 PROZP22891 400 aa20.44■□□□□ 0.86
CCDC188-202ENST00000444532 NDUFV1P49821 464 aa20.44■□□□□ 0.86
CCDC188-202ENST00000444532 DLX2Q07687 328 aaPredicted RBP20.44■□□□□ 0.86
CCDC188-202ENST00000444532 PKP1Q13835 747 aa20.44■□□□□ 0.86
CCDC188-202ENST00000444532 PTCRAQ6ISU1 281 aaPredicted RBP20.44■□□□□ 0.86
CCDC188-202ENST00000444532 SV2BQ7L1I2 683 aa20.44■□□□□ 0.86
CCDC188-202ENST00000444532 HAUS6Q7Z4H7 955 aa20.44■□□□□ 0.86
CCDC188-202ENST00000444532 UHRF1Q96T88 793 aaPredicted RBP20.44■□□□□ 0.86
CCDC188-202ENST00000444532 TCHPQ9BT92 498 aa20.44■□□□□ 0.86
CCDC188-202ENST00000444532 COLEC11Q9BWP8 271 aa20.44■□□□□ 0.86
CCDC188-202ENST00000444532 FAM50BQ9Y247 325 aa20.44■□□□□ 0.86
CCDC188-202ENST00000444532 GDAQ9Y2T3 454 aa20.44■□□□□ 0.86
CCDC188-202ENST00000444532 IRAK3Q9Y616 596 aa20.44■□□□□ 0.86
CCDC188-202ENST00000444532 GRXCR2A6NFK2 248 aa20.43■□□□□ 0.86
CCDC188-202ENST00000444532 C2orf71A6NGG8 1288 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms