RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 WNT8AQ9H1J5 351 aa11.92□□□□□ -0.5
FN1-211ENST00000443816 VCPKMTQ9H867 229 aa11.92□□□□□ -0.5
FN1-211ENST00000443816 CLCA2Q9UQC9 943 aa11.92□□□□□ -0.5
FN1-211ENST00000443816 MYO1DO94832 1006 aa11.92□□□□□ -0.5
FN1-211ENST00000443816 FTCDO95954 541 aa11.92□□□□□ -0.5
FN1-211ENST00000443816 SH3BGRP55822 239 aaPredicted RBP11.92□□□□□ -0.5
FN1-211ENST00000443816 SBK1Q52WX2 424 aa11.92□□□□□ -0.5
FN1-211ENST00000443816 CDC42EP5Q6NZY7 148 aa11.92□□□□□ -0.5
FN1-211ENST00000443816 SARS2Q9NP81 518 aaKnown RBP11.92□□□□□ -0.5
FN1-211ENST00000443816 CAMTA2O94983 1202 aa11.92□□□□□ -0.5
FN1-211ENST00000443816 LRG1P02750 347 aa11.92□□□□□ -0.5
FN1-211ENST00000443816 ARL4DP49703 201 aa11.92□□□□□ -0.5
FN1-211ENST00000443816 ZNF543Q08ER8 600 aa11.92□□□□□ -0.5
FN1-211ENST00000443816 SIK2Q9H0K1 926 aa11.92□□□□□ -0.5
FN1-211ENST00000443816 RASGRF2O14827 1237 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 PDIA5Q14554 519 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
FN1-211ENST00000443816 NDFIP2Q9NV92 336 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 DAGLAQ9Y4D2 1042 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 CCDC188H7C350 402 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 APOL1O14791 398 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 MX2P20592 715 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 BBS9Q3SYG4 887 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 ZNF34Q8IZ26 560 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 ZNF512Q96ME7 567 aaPredicted RBP11.91□□□□□ -0.5
FN1-211ENST00000443816 TBK1Q9UHD2 729 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 OR1G1P47890 313 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 ROR1Q01973 937 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 SAAL1Q96ER3 474 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 ZNF512BQ96KM6 892 aaPredicted RBP11.91□□□□□ -0.5
FN1-211ENST00000443816 C17orf102A2RUQ5 167 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 KPNA7A9QM74 516 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 NCF2P19878 526 aaPredicted RBP11.91□□□□□ -0.5
FN1-211ENST00000443816 DACT3Q96B18 629 aaPredicted RBP11.91□□□□□ -0.5
FN1-211ENST00000443816 KPNA6O60684 536 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 TPI1P60174 286 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 ADCY1Q08828 1119 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 SUDS3Q9H7L9 328 aaPredicted RBP11.91□□□□□ -0.5
FN1-211ENST00000443816 SYNDIG1Q9H7V2 258 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 CTSHP09668 335 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 RALBP11234 206 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 RMDN1Q96DB5 314 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 SRPK1Q96SB4 655 aaKnown RBP11.91□□□□□ -0.5
FN1-211ENST00000443816 COG4Q9H9E3 785 aa11.91□□□□□ -0.5
FN1-211ENST00000443816 COPS2P61201 443 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 LLGL1Q15334 1064 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 ANKS3Q6ZW76 656 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 C17orf53Q8N3J3 647 aaPredicted RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 MUC3BQ9H195 1237 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 UPF3AQ9H1J1 476 aaKnown RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 USP42Q9H9J4 1324 aaKnown RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 KRT38O76015 456 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 NDUFB10O96000 172 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 PRCPP42785 496 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 C2orf54Q08AI8 447 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 MAPRE1Q15691 268 aaKnown RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 C9orf131Q5VYM1 1079 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 CCDC197Q8NCU1 140 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 ZNF668Q96K58 619 aaPredicted RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 CPVLQ9H3G5 476 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 DNAJC8O75937 253 aaPredicted RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 PRKCQQ04759 706 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 NR1H3Q13133 447 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 CDKL3Q8IVW4 592 aaPredicted RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 ARHGAP18Q8N392 663 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 DHX35Q9H5Z1 703 aaKnown RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 SPTLC3Q9NUV7 552 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 ARHGEF28Q8N1W1 1705 aaKnown RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 SOWAHDA6NJG2 315 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 H7C4K7 107 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 GPR182O15218 404 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 HARS2P49590 506 aaKnown RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 SNRPFP62306 86 aaKnown RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 THEMIS2Q5TEJ8 643 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 EFCAB12Q6NXP0 572 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 PCSK9Q8NBP7 692 aaKnown RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 ZNF564Q8TBZ8 553 aaPredicted RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 ENTPD7Q9NQZ7 604 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 ADAMTS1Q9UHI8 967 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 BAIAP2L1Q9UHR4 511 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 HOXA2O43364 376 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 SRGAP2O75044 1071 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 SMIM24O75264 130 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 CYP2C19P33261 490 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 PDCD2Q16342 344 aaPredicted RBP11.9□□□□□ -0.5
FN1-211ENST00000443816 MROH8Q9H579 483 aa11.9□□□□□ -0.5
FN1-211ENST00000443816 PKP1Q13835 747 aa11.9□□□□□ -0.51
FN1-211ENST00000443816 CAPRIN1Q14444 709 aaKnown RBP11.9□□□□□ -0.51
FN1-211ENST00000443816 TRIP13Q15645 432 aaPredicted RBP11.9□□□□□ -0.51
FN1-211ENST00000443816 LRRC37BQ96QE4 947 aa11.9□□□□□ -0.51
FN1-211ENST00000443816 EGFL8Q99944 293 aa11.9□□□□□ -0.51
FN1-211ENST00000443816 LGALS16A8MUM7 142 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 ANP32DO95626 131 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 ACADSBP45954 432 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 VSTM4Q8IW00 320 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 NRBF2Q96F24 287 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 GBP5Q96PP8 586 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 SLITRK1Q96PX8 696 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 COLEC11Q9BWP8 271 aa11.89□□□□□ -0.51
FN1-211ENST00000443816 NYAP2Q9P242 653 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms