RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 TMEM179Q6ZVK1 233 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 MB21D2Q8IYB1 491 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-206ENST00000441089 MYOCDQ8IZQ8 938 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 SPICE1Q8N0Z3 855 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 DTWD2Q8NBA8 298 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 SECISBP2LQ93073 1101 aaKnown RBP5.53□□□□□ -1.52
PTPN4-206ENST00000441089 TCEANC2Q96MN5 208 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 JAKMIP1Q96N16 626 aaKnown RBP5.53□□□□□ -1.52
PTPN4-206ENST00000441089 CRNKL1Q9BZJ0 848 aaKnown RBP5.53□□□□□ -1.52
PTPN4-206ENST00000441089 TM6SF1Q9BZW5 370 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 NAPBQ9H115 298 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 VCPKMTQ9H867 229 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 CYP4F12Q9HCS2 524 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 ATP8A2Q9NTI2 1148 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 ANGPTL2Q9UKU9 493 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 PPP1R9AQ9ULJ8 1098 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 TMX2Q9Y320 296 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 NR2E1Q9Y466 385 aa5.53□□□□□ -1.52
PTPN4-206ENST00000441089 SPTAN1Q13813 2472 aaKnown RBP5.53□□□□□ -1.52
PTPN4-206ENST00000441089 SMG1Q96Q15 3661 aaKnown RBP5.53□□□□□ -1.52
PTPN4-206ENST00000441089 ASXL3Q9C0F0 2248 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 EMSYQ7Z589 1322 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 ACACAQ13085 2346 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 KAT6AQ92794 2004 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 METTL12A8MUP2 240 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 ZNF213O14771 459 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 EREGO14944 169 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 ATP2A1O14983 1001 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 ICMTO60725 284 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 BRD1O95696 1058 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 MMP1P03956 469 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 MYL3P08590 195 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 ADH5P11766 374 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 CASTP20810 708 aaKnown RBP5.52□□□□□ -1.53
PTPN4-206ENST00000441089 RPS6KB1P23443 525 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 SHMT1P34896 483 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 ANP32AP39687 249 aaKnown RBP5.52□□□□□ -1.53
PTPN4-206ENST00000441089 PLCD1P51178 756 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 NEK4P51957 841 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 AK2P54819 239 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 EXOSC10Q01780 885 aaKnown RBP5.52□□□□□ -1.53
PTPN4-206ENST00000441089 ST3GAL1Q11201 340 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 TOB2Q14106 344 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-206ENST00000441089 PLCL1Q15111 1095 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 PTGISQ16647 500 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 IMMTQ16891 758 aaKnown RBP5.52□□□□□ -1.53
PTPN4-206ENST00000441089 SBK1Q52WX2 424 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 KIAA1755Q5JYT7 1200 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 C12orf60Q5U649 245 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 SEZ6L2Q6UXD5 910 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 CYB5R4Q7L1T6 521 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 STK11IPQ8N1F8 1099 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 FIBCD1Q8N539 461 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 DCLK2Q8N568 766 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 GLIS3Q8NEA6 775 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 CHST13Q8NET6 341 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 REPS2Q8NFH8 660 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 STAG1Q8WVM7 1258 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 SUSD6Q92537 303 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 SNX21Q969T3 373 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 DYNLL2Q96FJ2 89 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 FGD4Q96M96 766 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 NEK1Q96PY6 1258 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 NACAP1Q9BZK3 213 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 SEMA6CQ9H3T2 930 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 C1GALT1Q9NS00 363 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 FBXO28Q9NVF7 368 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 MCM9Q9NXL9 1143 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 CLEC1BQ9P126 229 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 NCDNQ9UBB6 729 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 FOXD3Q9UJU5 478 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-206ENST00000441089 ANAPC4Q9UJX5 808 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.52□□□□□ -1.53
PTPN4-206ENST00000441089 CTDP1Q9Y5B0 961 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-206ENST00000441089 R4GN57 208 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 TEP1Q99973 2627 aaKnown RBP5.52□□□□□ -1.53
PTPN4-206ENST00000441089 PTPN13Q12923 2485 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 TTC3P53804 2025 aa5.52□□□□□ -1.53
PTPN4-206ENST00000441089 MINDY4BA8MYZ0 360 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 B4E1Z4 1266 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 GRM6O15303 877 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 NBNO60934 754 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 PRDM1O75626 825 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 LARGE1O95461 756 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 ECEL1O95672 775 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 PROS1P07225 676 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 RNASE1P07998 156 aaKnown RBP5.51□□□□□ -1.53
PTPN4-206ENST00000441089 FGRP09769 529 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 SRGAP2BP0DMP2 458 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 ESRRAP11474 423 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-206ENST00000441089 RAB6AP20340 208 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 GTF2F1P35269 517 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPN4-206ENST00000441089 BMPR1AP36894 532 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 ICA1Q05084 483 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 GABPAQ06546 454 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 MESP2Q0VG99 397 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 KRT32Q14532 448 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 GPNMBQ14956 572 aa5.51□□□□□ -1.53
PTPN4-206ENST00000441089 DUSP28Q4G0W2 176 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms