RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 GRIK3Q13003 919 aa21.89■■□□□ 1.09
SHROOM1-204ENST00000440118 CBX2Q14781 532 aaPredicted RBP21.89■■□□□ 1.09
SHROOM1-204ENST00000440118 IL17AQ16552 155 aa21.89■■□□□ 1.09
SHROOM1-204ENST00000440118 TMEM184AQ6ZMB5 413 aa21.89■■□□□ 1.09
SHROOM1-204ENST00000440118 COLGALT2Q8IYK4 626 aa21.89■■□□□ 1.09
SHROOM1-204ENST00000440118 RASSF8Q8NHQ8 419 aa21.89■■□□□ 1.09
SHROOM1-204ENST00000440118 RPGRIP1Q96KN7 1286 aa21.89■■□□□ 1.09
SHROOM1-204ENST00000440118 NT5C3AQ9H0P0 336 aa21.89■■□□□ 1.09
SHROOM1-204ENST00000440118 MRPL17Q9NRX2 175 aaKnown RBP21.89■■□□□ 1.09
SHROOM1-204ENST00000440118 ZMYM2Q9UBW7 1377 aa21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 ACKR2O00590 384 aa21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 C2CD2LO14523 706 aa21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 INPPL1O15357 1258 aa21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 PDCP20941 246 aa21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 PEX3P56589 373 aa21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 PTPN14Q15678 1187 aa21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 ARL6IP4Q66PJ3 421 aaKnown RBP21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 KIAA1841Q6NSI8 718 aa21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 PPFIBP1Q86W92 1011 aa21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 COLEC11Q9BWP8 271 aa21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 PHF7Q9BWX1 381 aaPredicted RBP21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 CCDC113Q9H0I3 377 aa21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 DZANK1Q9NVP4 752 aa21.88■■□□□ 1.09
SHROOM1-204ENST00000440118 PHLPP2Q6ZVD8 1323 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 K7ERI5 159 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 HIP1RO75146 1068 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 KLRC2P26717 231 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 KCNC3Q14003 757 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 DCAF4L1Q3SXM0 396 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 BRAPQ7Z569 592 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 PLIN2Q99541 437 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 RUSC1Q9BVN2 902 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 HERC2P3Q9BVR0 1158 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 VN1R3Q9BXE9 311 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 MARCH5Q9NX47 278 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 SSX2IPQ9Y2D8 614 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 IRAK3Q9Y616 596 aa21.87■■□□□ 1.09
SHROOM1-204ENST00000440118 RECQL4O94761 1208 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 BMP15O95972 392 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 SOD2P04179 222 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 GLUD2P49448 558 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 DSC1Q08554 894 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 ATF7IP2Q5U623 682 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 SYCE2Q6PIF2 218 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 CABP7Q86V35 215 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 RNF135Q8IUD6 432 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 KMT5AQ9NQR1 393 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 TSHZ2Q9NRE2 1034 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 MIOSQ9NXC5 875 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 SNTG2Q9NY99 539 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 MUTYHQ9UIF7 546 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 USP20Q9Y2K6 914 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 GDAQ9Y2T3 454 aa21.86■■□□□ 1.09
SHROOM1-204ENST00000440118 TRIP11Q15643 1979 aa21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 TTLL13PA6NNM8 815 aa21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 EPCAMP16422 314 aa21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 SP100P23497 879 aaPredicted RBP21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 ITIH3Q06033 890 aa21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 RAD51AP2Q09MP3 1159 aa21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 RARS2Q5T160 578 aaKnown RBP21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 RINT1Q6NUQ1 792 aa21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 SUSD6Q92537 303 aa21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 CALML4Q96GE6 196 aa21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 NECTIN4Q96NY8 510 aa21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 LRFN3Q9BTN0 628 aa21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 MMTAG2Q9BU76 263 aaKnown RBP21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 TIPINQ9BVW5 301 aa21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 HCN4Q9Y3Q4 1203 aa21.85■■□□□ 1.09
SHROOM1-204ENST00000440118 UBA7P41226 1012 aa21.84■■□□□ 1.09
SHROOM1-204ENST00000440118 NPTX2P47972 431 aa21.84■■□□□ 1.09
SHROOM1-204ENST00000440118 ELMSAN1Q6PJG2 1045 aa21.84■■□□□ 1.09
SHROOM1-204ENST00000440118 KCNK18Q7Z418 384 aa21.84■■□□□ 1.09
SHROOM1-204ENST00000440118 AK8Q96MA6 479 aa21.84■■□□□ 1.09
SHROOM1-204ENST00000440118 RIPOR3Q96MK2 946 aa21.84■■□□□ 1.09
SHROOM1-204ENST00000440118 S1PR5Q9H228 398 aa21.84■■□□□ 1.09
SHROOM1-204ENST00000440118 CITO14578 2027 aa21.84■■□□□ 1.09
SHROOM1-204ENST00000440118 CASTOR2A6NHX0 329 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 GPR37L1O60883 481 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 TADA2AO75478 443 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 ADH1AP07327 375 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 TUSC3Q13454 348 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 ZNF568Q3ZCX4 644 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 EEF1DP3Q658K8 133 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 ZBTB33Q86T24 672 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 KCTD17Q8N5Z5 321 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 KLHL5Q96PQ7 755 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 MRPL4Q9BYD3 311 aaKnown RBP21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 BACH2Q9BYV9 841 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 ADAM7Q9H2U9 754 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 SFXN1Q9H9B4 322 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 C17orf75Q9HAS0 396 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 ADAM28Q9UKQ2 775 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 NR2E1Q9Y466 385 aa21.83■■□□□ 1.09
SHROOM1-204ENST00000440118 PLXNA3P51805 1871 aa21.83■■□□□ 1.08
SHROOM1-204ENST00000440118 LOC730098B7Z3J9 87 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 EDN1P05305 212 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 THP07101 528 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 CNPP09543 421 aaKnown RBP21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 MTHFRP42898 656 aa21.82■■□□□ 1.08
SHROOM1-204ENST00000440118 SMTNP53814 917 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms