RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 RAPGEFL1Q9UHV5 662 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 DNM3Q9UQ16 869 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 PCDHB6Q9Y5E3 794 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 ARID2Q68CP9 1835 aa20.77■□□□□ 0.92
CCDC78-204ENST00000439619 SOD2P04179 222 aa20.77■□□□□ 0.92
CCDC78-204ENST00000439619 SSBP05455 408 aaKnown RBP eCLIP20.77■□□□□ 0.92
CCDC78-204ENST00000439619 AKAP5P24588 427 aa20.77■□□□□ 0.92
CCDC78-204ENST00000439619 GRIK3Q13003 919 aa20.77■□□□□ 0.92
CCDC78-204ENST00000439619 ATAT1Q5SQI0 421 aa20.77■□□□□ 0.92
CCDC78-204ENST00000439619 IGSF22Q8N9C0 903 aa20.77■□□□□ 0.92
CCDC78-204ENST00000439619 EDAQ92838 391 aa20.77■□□□□ 0.92
CCDC78-204ENST00000439619 ZFP42Q96MM3 310 aa20.77■□□□□ 0.92
CCDC78-204ENST00000439619 DDX19AQ9NUU7 478 aaKnown RBP20.77■□□□□ 0.92
CCDC78-204ENST00000439619 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.77■□□□□ 0.92
CCDC78-204ENST00000439619 B4GALT3O60512 393 aa20.76■□□□□ 0.91
CCDC78-204ENST00000439619 PRKCBP05771 671 aa20.76■□□□□ 0.91
CCDC78-204ENST00000439619 LIG1P18858 919 aa20.76■□□□□ 0.91
CCDC78-204ENST00000439619 TOB1P50616 345 aaPredicted RBP20.76■□□□□ 0.91
CCDC78-204ENST00000439619 DSC1Q08554 894 aa20.76■□□□□ 0.91
CCDC78-204ENST00000439619 ZBTB33Q86T24 672 aa20.76■□□□□ 0.91
CCDC78-204ENST00000439619 CDR2LQ86X02 465 aaPredicted RBP20.76■□□□□ 0.91
CCDC78-204ENST00000439619 MFSD14AQ96MC6 490 aa20.76■□□□□ 0.91
CCDC78-204ENST00000439619 TSHZ2Q9NRE2 1034 aa20.76■□□□□ 0.91
CCDC78-204ENST00000439619 SMC3Q9UQE7 1217 aa20.76■□□□□ 0.91
CCDC78-204ENST00000439619 ACKR2O00590 384 aa20.75■□□□□ 0.91
CCDC78-204ENST00000439619 ADH1AP07327 375 aa20.75■□□□□ 0.91
CCDC78-204ENST00000439619 GJB2P29033 226 aa20.75■□□□□ 0.91
CCDC78-204ENST00000439619 GLUD2P49448 558 aa20.75■□□□□ 0.91
CCDC78-204ENST00000439619 RARS2Q5T160 578 aaKnown RBP20.75■□□□□ 0.91
CCDC78-204ENST00000439619 KLHL5Q96PQ7 755 aa20.75■□□□□ 0.91
CCDC78-204ENST00000439619 HERC2P3Q9BVR0 1158 aa20.75■□□□□ 0.91
CCDC78-204ENST00000439619 SFXN1Q9H9B4 322 aa20.75■□□□□ 0.91
CCDC78-204ENST00000439619 PHLPP2Q6ZVD8 1323 aa20.75■□□□□ 0.91
CCDC78-204ENST00000439619 C2CD2LO14523 706 aa20.74■□□□□ 0.91
CCDC78-204ENST00000439619 CNPP09543 421 aaKnown RBP20.74■□□□□ 0.91
CCDC78-204ENST00000439619 EPCAMP16422 314 aa20.74■□□□□ 0.91
CCDC78-204ENST00000439619 PLA2G5P39877 138 aa20.74■□□□□ 0.91
CCDC78-204ENST00000439619 DCAF4L1Q3SXM0 396 aa20.74■□□□□ 0.91
CCDC78-204ENST00000439619 KCTD17Q8N5Z5 321 aa20.74■□□□□ 0.91
CCDC78-204ENST00000439619 SLC22A17Q8WUG5 538 aa20.74■□□□□ 0.91
CCDC78-204ENST00000439619 DRC1Q96MC2 740 aa20.74■□□□□ 0.91
CCDC78-204ENST00000439619 FBXL18Q96ME1 805 aa20.74■□□□□ 0.91
CCDC78-204ENST00000439619 VN1R3Q9BXE9 311 aa20.74■□□□□ 0.91
CCDC78-204ENST00000439619 PDZD7Q9H5P4 517 aa20.74■□□□□ 0.91
CCDC78-204ENST00000439619 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.74■□□□□ 0.91
CCDC78-204ENST00000439619 KLK14Q9P0G3 267 aa20.74■□□□□ 0.91
CCDC78-204ENST00000439619 KCNG1Q9UIX4 513 aa20.74■□□□□ 0.91
CCDC78-204ENST00000439619 K7ERI5 159 aa20.73■□□□□ 0.91
CCDC78-204ENST00000439619 TADA2AO75478 443 aa20.73■□□□□ 0.91
CCDC78-204ENST00000439619 CREMQ03060 361 aa20.73■□□□□ 0.91
CCDC78-204ENST00000439619 BSNDQ8WZ55 320 aa20.73■□□□□ 0.91
CCDC78-204ENST00000439619 CDK5RAP3Q96JB5 506 aa20.73■□□□□ 0.91
CCDC78-204ENST00000439619 MARCH5Q9NX47 278 aa20.73■□□□□ 0.91
CCDC78-204ENST00000439619 MIOSQ9NXC5 875 aa20.73■□□□□ 0.91
CCDC78-204ENST00000439619 CCDC169A6NNP5 214 aa20.72■□□□□ 0.91
CCDC78-204ENST00000439619 CLCN4P51793 760 aa20.72■□□□□ 0.91
CCDC78-204ENST00000439619 ZXDAP98168 799 aa20.72■□□□□ 0.91
CCDC78-204ENST00000439619 DMP1Q13316 513 aaPredicted RBP20.72■□□□□ 0.91
CCDC78-204ENST00000439619 TUSC3Q13454 348 aa20.72■□□□□ 0.91
CCDC78-204ENST00000439619 ZRSR1Q15695 479 aaKnown RBP20.72■□□□□ 0.91
CCDC78-204ENST00000439619 ECM1Q16610 540 aa20.72■□□□□ 0.91
CCDC78-204ENST00000439619 USP41Q3LFD5 358 aa20.72■□□□□ 0.91
CCDC78-204ENST00000439619 TRIM67Q6ZTA4 783 aa20.72■□□□□ 0.91
CCDC78-204ENST00000439619 TIPINQ9BVW5 301 aa20.72■□□□□ 0.91
CCDC78-204ENST00000439619 CCDC113Q9H0I3 377 aa20.72■□□□□ 0.91
CCDC78-204ENST00000439619 NT5C3AQ9H0P0 336 aa20.72■□□□□ 0.91
CCDC78-204ENST00000439619 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCDC78-204ENST00000439619 ADAM28Q9UKQ2 775 aa20.72■□□□□ 0.91
CCDC78-204ENST00000439619 LILRB3O75022 631 aa20.71■□□□□ 0.91
CCDC78-204ENST00000439619 GLUD1P00367 558 aa20.71■□□□□ 0.91
CCDC78-204ENST00000439619 THP07101 528 aa20.71■□□□□ 0.91
CCDC78-204ENST00000439619 SP100P23497 879 aaPredicted RBP20.71■□□□□ 0.91
CCDC78-204ENST00000439619 PTPN21Q16825 1174 aa20.71■□□□□ 0.91
CCDC78-204ENST00000439619 ATF7IP2Q5U623 682 aa20.71■□□□□ 0.91
CCDC78-204ENST00000439619 LARP1BQ659C4 914 aaKnown RBP20.71■□□□□ 0.91
CCDC78-204ENST00000439619 TMC5Q6UXY8 1006 aa20.71■□□□□ 0.91
CCDC78-204ENST00000439619 GPR65Q8IYL9 337 aa20.71■□□□□ 0.91
CCDC78-204ENST00000439619 PLCD3Q8N3E9 789 aa20.71■□□□□ 0.91
CCDC78-204ENST00000439619 C12orf76Q8N812 135 aaPredicted RBP20.71■□□□□ 0.91
CCDC78-204ENST00000439619 POMKQ9H5K3 350 aa20.71■□□□□ 0.91
CCDC78-204ENST00000439619 C17orf75Q9HAS0 396 aa20.71■□□□□ 0.91
CCDC78-204ENST00000439619 SNTG2Q9NY99 539 aa20.71■□□□□ 0.91
CCDC78-204ENST00000439619 RBM19Q9Y4C8 960 aaKnown RBP20.71■□□□□ 0.91
CCDC78-204ENST00000439619 SF3B1O75533 1304 aaKnown RBP eCLIP20.71■□□□□ 0.91
CCDC78-204ENST00000439619 E9PMD0 336 aa20.7■□□□□ 0.9
CCDC78-204ENST00000439619 ATP2C1P98194 919 aaPredicted RBP20.7■□□□□ 0.9
CCDC78-204ENST00000439619 DSG1Q02413 1049 aa20.7■□□□□ 0.9
CCDC78-204ENST00000439619 HSP90AA2PQ14568 343 aaPredicted RBP20.7■□□□□ 0.9
CCDC78-204ENST00000439619 ARL6IP4Q66PJ3 421 aaKnown RBP20.7■□□□□ 0.9
CCDC78-204ENST00000439619 FUT10Q6P4F1 479 aa20.7■□□□□ 0.9
CCDC78-204ENST00000439619 HFE2Q6ZVN8 426 aa20.7■□□□□ 0.9
CCDC78-204ENST00000439619 TDRD5Q8NAT2 981 aaKnown RBP20.7■□□□□ 0.9
CCDC78-204ENST00000439619 GSTCDQ8NEC7 633 aa20.7■□□□□ 0.9
CCDC78-204ENST00000439619 ACSF2Q96CM8 615 aaPredicted RBP20.7■□□□□ 0.9
CCDC78-204ENST00000439619 TBC1D32Q96NH3 1257 aa20.7■□□□□ 0.9
CCDC78-204ENST00000439619 KIFC3Q9BVG8 833 aa20.7■□□□□ 0.9
CCDC78-204ENST00000439619 KCNH6Q9H252 994 aa20.7■□□□□ 0.9
CCDC78-204ENST00000439619 USTQ9Y2C2 406 aa20.7■□□□□ 0.9
CCDC78-204ENST00000439619 TMEM221A6NGB7 291 aa20.69■□□□□ 0.9
CCDC78-204ENST00000439619 PP2D1A8MPX8 630 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms