RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 STXBP4Q6ZWJ1 553 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 USP38Q8NB14 1042 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.87■□□□□ 0.29
DHFR-201ENST00000439211 SIKE1Q9BRV8 207 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 FAF1Q9UNN5 650 aaPredicted RBP16.87■□□□□ 0.29
DHFR-201ENST00000439211 NOC2LQ9Y3T9 749 aaKnown RBP16.87■□□□□ 0.29
DHFR-201ENST00000439211 STRCP1A6NGW2 1772 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 MAP3K13O43283 966 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 TLR2O60603 784 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 ENTPD5O75356 428 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 EMC10Q5UCC4 262 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 FAM178BQ8IXR5 827 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 WDR60Q8WVS4 1066 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 HAS1Q92839 578 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 PITPNM3Q9BZ71 974 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 CELF4Q9BZC1 486 aaKnown RBP16.86■□□□□ 0.29
DHFR-201ENST00000439211 METTL14Q9HCE5 456 aaKnown RBP16.86■□□□□ 0.29
DHFR-201ENST00000439211 GRID2IPA4D2P6 1211 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 IFI35P80217 286 aaPredicted RBP16.86■□□□□ 0.29
DHFR-201ENST00000439211 C6orf163Q5TEZ5 329 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 SNX30Q5VWJ9 437 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 RFX8Q6ZV50 586 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 CCDC80Q76M96 950 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 NANOGNBQ7Z5D8 188 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 TRIM59Q8IWR1 403 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 LRRC37BQ96QE4 947 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 UNC45AQ9H3U1 944 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 POLLQ9UGP5 575 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 PPP1R9AQ9ULJ8 1098 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 GSTTP1A0A1W2PQM5 241 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 E2F6O75461 281 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 BBOX1O75936 387 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 LMNAP02545 664 aaKnown RBP16.86■□□□□ 0.29
DHFR-201ENST00000439211 CASP4P49662 377 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 RCN1Q15293 331 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 AGGF1Q8N302 714 aaeCLIP16.86■□□□□ 0.295e-13■■■□□ 18.9
DHFR-201ENST00000439211 C17orf50Q8WW18 174 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 DNAJC19Q96DA6 116 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 PBKQ96KB5 322 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 RASAL2Q9UJF2 1139 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 SLC4A7Q9Y6M7 1214 aa16.86■□□□□ 0.29
DHFR-201ENST00000439211 ZNF571Q7Z3V5 609 aaPredicted RBP16.85■□□□□ 0.29
DHFR-201ENST00000439211 CROCCP2Q86T23 111 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 CATSPER3Q86XQ3 398 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 CNTNAP4Q9C0A0 1308 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 F8VZ95 297 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 COPB2P35606 906 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 FLT3P36888 993 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 CASP5P51878 434 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 UAP1Q16222 522 aaPredicted RBP16.85■□□□□ 0.29
DHFR-201ENST00000439211 SPATA24Q86W54 205 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 TGS1Q96RS0 853 aaKnown RBP16.85■□□□□ 0.29
DHFR-201ENST00000439211 CYTH2Q99418 400 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 TSPYL2Q9H2G4 693 aaPredicted RBP16.85■□□□□ 0.29
DHFR-201ENST00000439211 SNX24Q9Y343 169 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 CTDP1Q9Y5B0 961 aaPredicted RBP16.85■□□□□ 0.29
DHFR-201ENST00000439211 ACADSP16219 412 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 TM4SF1P30408 202 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 RHBDL3P58872 404 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 SGSM1Q2NKQ1 1148 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 ODR4Q5SWX8 454 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 HGSNATQ68CP4 663 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 NME8Q8N427 588 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 PDCD7Q8N8D1 485 aaKnown RBP16.85■□□□□ 0.29
DHFR-201ENST00000439211 SCG3Q8WXD2 468 aaKnown RBP16.85■□□□□ 0.29
DHFR-201ENST00000439211 RXFP1Q9HBX9 757 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 NAGPAQ9UK23 515 aa16.85■□□□□ 0.29
DHFR-201ENST00000439211 TRIM49P0CI25 452 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 TRIM49CP0CI26 452 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 NMT1P30419 496 aaKnown RBP16.84■□□□□ 0.29
DHFR-201ENST00000439211 PMS2P54278 862 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 DISP2A7MBM2 1401 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 PAEPP09466 180 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 SMARCA1P28370 1054 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 NFIAQ12857 509 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 METTL13Q8N6R0 699 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 TTC8Q8TAM2 541 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 TRIM51Q9BSJ1 452 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 FAM192AQ9GZU8 254 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 PCIF1Q9H4Z3 704 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 DCLRE1BQ9H816 532 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 DDX4Q9NQI0 724 aaKnown RBP16.84■□□□□ 0.29
DHFR-201ENST00000439211 LRRC42Q9Y546 428 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 CAPN9O14815 690 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 PJA2O43164 708 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 GAS7O60861 476 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 MEI1Q5TIA1 1274 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 OCEL1Q9H607 264 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 ABCB11O95342 1321 aa16.84■□□□□ 0.29
DHFR-201ENST00000439211 SPOPO43791 374 aa16.83■□□□□ 0.29
DHFR-201ENST00000439211 TMEM119Q4V9L6 283 aa16.83■□□□□ 0.29
DHFR-201ENST00000439211 ZC2HC1CQ53FD0 456 aaPredicted RBP16.83■□□□□ 0.29
DHFR-201ENST00000439211 OLFM3Q96PB7 478 aa16.83■□□□□ 0.29
DHFR-201ENST00000439211 CICQ96RK0 1608 aaPredicted RBP16.83■□□□□ 0.29
DHFR-201ENST00000439211 ATP5HO75947 161 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 EPHB2P29323 1055 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 BNIP1Q12981 228 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 MIGA2Q7L4E1 593 aa16.83■□□□□ 0.28
DHFR-201ENST00000439211 PIGWQ7Z7B1 504 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms