RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ITGB5P18084 799 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 ADCY8P40145 1251 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 OAZ1P54368 228 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 FIGNQ5HY92 759 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 OR6J1Q8NGC5 347 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 FAM149B1Q96BN6 582 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 DNAJC19Q96DA6 116 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 HEXIM2Q96MH2 286 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 STK38LQ9Y2H1 464 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 MYH8P13535 1937 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 BAZ2AQ9UIF9 1905 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 CXCL11O14625 94 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 GH1P01241 217 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 RFC5P40937 340 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 MTMR3Q13615 1198 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 CCDC6Q16204 474 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 NIPA1Q7RTP0 329 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 CCDC89Q8N998 374 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 SMC1BQ8NDV3 1235 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 FAM71BQ8TC56 605 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 GBA2Q9HCG7 927 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 ECM29Q5VYK3 1845 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 NFKBIEO00221 500 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 MED7O43513 233 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 SYF2O95926 243 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 IFNAR2P48551 515 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 SOX10P56693 466 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 AMPD2Q01433 879 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 SREBF2Q12772 1141 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 CBWD2Q8IUF1 395 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 AGPAT1Q99943 283 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 DUSP10Q9Y6W6 482 aa12.39□□□□□ -0.43
TRAPPC9-202ENST00000438773 IRF6O14896 467 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 ATP2A2P16615 1042 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 TNFAIP2Q03169 654 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 SNX1Q13596 522 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 ENOSF1Q7L5Y1 443 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 ERICH1Q86X53 443 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 TMEM35BQ8NCS4 154 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 RFFLQ8WZ73 363 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 PPP1R12CQ9BZL4 782 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 ASCC2Q9H1I8 757 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 SNED1Q8TER0 1413 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 EIF4E1BA6NMX2 242 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 TBXAS1P24557 533 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 PON1P27169 355 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 GALCP54803 685 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 SGO2Q562F6 1265 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 PPP1R2P3Q6NXS1 205 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 FBXO16Q8IX29 292 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 IQCGQ9H095 443 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 ERAP1Q9NZ08 941 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 MYH14Q7Z406 1995 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 A0A087X0T9 212 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 CAPN9O14815 690 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 KIAA0391O15091 583 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 FAM228BP0C875 321 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 CYP2B6P20813 491 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 CASP5P51878 434 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 KCNA1Q09470 495 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 KRT81Q14533 505 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 TAF12Q16514 161 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 ECM1Q16610 540 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 DENND2CQ68D51 928 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 VSIG10LQ86VR7 867 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 CDR2LQ86X02 465 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 DNERQ8NFT8 737 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 RAET1EQ8TD07 263 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 GTF3C2Q8WUA4 911 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 SNX25Q9H3E2 840 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 TOPORSQ9NS56 1045 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 SNX12Q9UMY4 172 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 TRAF3IP3Q9Y228 551 aa12.38□□□□□ -0.43
TRAPPC9-202ENST00000438773 HBP1O60381 514 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 GNA15P30679 374 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 EPHB4P54760 987 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 IER5Q5VY09 327 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 CATSPERGQ6ZRH7 1159 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 MTMR14Q8NCE2 650 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 HVCN1Q96D96 273 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 KLRG1Q96E93 195 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 CDCA5Q96FF9 252 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 MROH8Q9H579 483 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 ESYT3A0FGR9 886 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 CLTAP09496 248 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 GGCXP38435 758 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 PDCLQ13371 301 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 ZNF211Q13398 564 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 UAP1Q16222 522 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 TWF2Q6IBS0 349 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 EFCAB12Q6NXP0 572 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 MOB2Q70IA6 237 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 B4GALNT4Q76KP1 1039 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 ANKRD42Q8N9B4 389 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 ZNF507Q8TCN5 953 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 RSAD2Q8WXG1 361 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 LACRTQ9GZZ8 138 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 ZFYVE28Q9HCC9 887 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
TRAPPC9-202ENST00000438773 ZNF541Q9H0D2 1346 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms