RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 DHX8Q14562 1220 aaKnown RBP27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 PUS10Q3MIT2 529 aaKnown RBP27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 ARSHQ5FYA8 562 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 SPECC1Q5M775 1068 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 NT5DC1Q5TFE4 455 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 PLPP4Q5VZY2 271 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 ADGRD2Q7Z7M1 963 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 EFHBQ8N7U6 833 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 ADAMTS19Q8TE59 1207 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 CLIC6Q96NY7 704 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 STK17AQ9UEE5 414 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 TNFSF13BQ9Y275 285 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 FAN1Q9Y2M0 1017 aa27.2■■□□□ 1.94
RAPGEF1-206ENST00000438647 CUL9Q8IWT3 2517 aa27.19■■□□□ 1.94
RAPGEF1-206ENST00000438647 SLC16A4O15374 487 aa27.19■■□□□ 1.94
RAPGEF1-206ENST00000438647 EDN1P05305 212 aa27.19■■□□□ 1.94
RAPGEF1-206ENST00000438647 KRT18P05783 430 aaKnown RBP27.19■■□□□ 1.94
RAPGEF1-206ENST00000438647 DDIT3P35638 169 aa27.19■■□□□ 1.94
RAPGEF1-206ENST00000438647 STRN3Q13033 797 aa27.19■■□□□ 1.94
RAPGEF1-206ENST00000438647 MCM6Q14566 821 aa27.19■■□□□ 1.94
RAPGEF1-206ENST00000438647 SMC1AQ14683 1233 aaKnown RBP27.19■■□□□ 1.94
RAPGEF1-206ENST00000438647 RBM23Q86U06 439 aaKnown RBP27.19■■□□□ 1.94
RAPGEF1-206ENST00000438647 SPRYD3Q8NCJ5 442 aa27.19■■□□□ 1.94
RAPGEF1-206ENST00000438647 LINC00301Q8NCQ3 95 aa27.19■■□□□ 1.94
RAPGEF1-206ENST00000438647 USP20Q9Y2K6 914 aa27.19■■□□□ 1.94
RAPGEF1-206ENST00000438647 PCDHGC5Q9Y5F6 944 aa27.19■■□□□ 1.94
RAPGEF1-206ENST00000438647 F13A1P00488 732 aa27.18■■□□□ 1.94
RAPGEF1-206ENST00000438647 SCP2P22307 547 aa27.18■■□□□ 1.94
RAPGEF1-206ENST00000438647 GRIK3Q13003 919 aa27.18■■□□□ 1.94
RAPGEF1-206ENST00000438647 ADAM15Q13444 863 aa27.18■■□□□ 1.94
RAPGEF1-206ENST00000438647 FOXD4L5Q5VV16 416 aaPredicted RBP27.18■■□□□ 1.94
RAPGEF1-206ENST00000438647 EEF1DP3Q658K8 133 aa27.18■■□□□ 1.94
RAPGEF1-206ENST00000438647 USP49Q70CQ1 688 aa27.18■■□□□ 1.94
RAPGEF1-206ENST00000438647 DDX53Q86TM3 631 aaKnown RBP27.18■■□□□ 1.94
RAPGEF1-206ENST00000438647 TMEM173Q86WV6 379 aaPredicted RBP27.18■■□□□ 1.94
RAPGEF1-206ENST00000438647 LRRC15Q8TF66 581 aa27.18■■□□□ 1.94
RAPGEF1-206ENST00000438647 FOXD4L4Q8WXT5 416 aaPredicted RBP27.18■■□□□ 1.94
RAPGEF1-206ENST00000438647 ACO2Q99798 780 aaKnown RBP27.18■■□□□ 1.94
RAPGEF1-206ENST00000438647 REEP2Q9BRK0 252 aa27.18■■□□□ 1.94
RAPGEF1-206ENST00000438647 NPHP3-ACAD11A0A0J9YXS1 232 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 H3BQ06 376 aaPredicted RBP27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 SPTLC2O15270 562 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 B4GALT3O60512 393 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 FAM13AO94988 1023 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 YEATS4O95619 227 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 GTF2F1P35269 517 aaKnown RBP eCLIP27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 NDUFV1P49821 464 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 CACNB1Q02641 598 aaPredicted RBP27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 DSC1Q08554 894 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 RRAGBQ5VZM2 374 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 CCDC73Q6ZRK6 1079 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 COLGALT2Q8IYK4 626 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 VPS52Q8N1B4 723 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 TMEM161BQ8NDZ6 487 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 UHRF1Q96T88 793 aaPredicted RBP27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 PARVGQ9HBI0 331 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 SNTG2Q9NY99 539 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 FAM50BQ9Y247 325 aa27.17■■□□□ 1.94
RAPGEF1-206ENST00000438647 NRP1O14786 923 aa27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 PPP6R2O75170 966 aa27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 TBCAO75347 108 aaKnown RBP27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 RECQL4O94761 1208 aa27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 LTBRP36941 435 aa27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 OR1G1P47890 313 aa27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 GIT2Q14161 759 aa27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 DUSP6Q16828 381 aa27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 TAS1R3Q7RTX0 852 aa27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 GSTCDQ8NEC7 633 aa27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 MIOSQ9NXC5 875 aa27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 KLK14Q9P0G3 267 aa27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 TFIP11Q9UBB9 837 aaKnown RBP27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 MYH11P35749 1972 aa27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 TTC28Q96AY4 2481 aa27.16■■□□□ 1.94
RAPGEF1-206ENST00000438647 SRGAP2BP0DMP2 458 aa27.15■■□□□ 1.94
RAPGEF1-206ENST00000438647 ZNF568Q3ZCX4 644 aa27.15■■□□□ 1.94
RAPGEF1-206ENST00000438647 ATL3Q6DD88 541 aa27.15■■□□□ 1.94
RAPGEF1-206ENST00000438647 PTCRAQ6ISU1 281 aaPredicted RBP27.15■■□□□ 1.94
RAPGEF1-206ENST00000438647 MRPL43Q8N983 215 aaKnown RBP27.15■■□□□ 1.94
RAPGEF1-206ENST00000438647 TARS2Q9BW92 718 aaKnown RBP27.15■■□□□ 1.94
RAPGEF1-206ENST00000438647 ZBP1Q9H171 429 aa27.15■■□□□ 1.94
RAPGEF1-206ENST00000438647 PER2O15055 1255 aa27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 LINC01565O15544 149 aa27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 TBX10O75333 385 aa27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 CTSAP10619 480 aa27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 MAPTP10636 758 aaKnown RBP27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 CA8P35219 290 aa27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 ZNF131P52739 623 aa27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 NCKAP1LP55160 1127 aa27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 MYCT1Q8N699 235 aa27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 BCL7CQ8WUZ0 217 aaPredicted RBP27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 KCNN1Q92952 543 aa27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 TCHPQ9BT92 498 aa27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 PTPRHQ9HD43 1115 aa27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 PRG3Q9Y2Y8 225 aaPredicted RBP27.14■■□□□ 1.94
RAPGEF1-206ENST00000438647 MYH15Q9Y2K3 1946 aa27.14■■□□□ 1.93
RAPGEF1-206ENST00000438647 HIDE1A8MVS5 230 aa27.13■■□□□ 1.93
RAPGEF1-206ENST00000438647 CXCL14O95715 111 aa27.13■■□□□ 1.93
RAPGEF1-206ENST00000438647 ABCD1P33897 745 aa27.13■■□□□ 1.93
RAPGEF1-206ENST00000438647 SV2BQ7L1I2 683 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms