RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 PQLC1Q8N2U9 271 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 DPF2Q92785 391 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 HOXB13Q92826 284 aaPredicted RBP4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 CLIP3Q96DZ5 547 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 DPYSL5Q9BPU6 564 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 ENKD1Q9H0I2 346 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 MEGF9Q9H1U4 602 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 EPC1Q9H2F5 836 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 MAN1C1Q9NR34 630 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 LANCL2Q9NS86 450 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 TMEM140Q9NV12 185 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 RTEL1Q9NZ71 1219 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 MOCS1Q9NZB8 636 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 PPP4R1LQ9P1A2 415 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 TRPS1Q9UHF7 1281 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 CNOT11Q9UKZ1 510 aaKnown RBP4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 CLCA2Q9UQC9 943 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 IPPQ9Y573 584 aa4.91□□□□□ -1.62
LSM1P1-201ENST00000438629 SLC16A6O15403 523 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 HOXA3O43365 443 aaPredicted RBP4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 MARCH6O60337 910 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 MFAP3LO75121 409 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 RAD17O75943 681 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 HOXA5P20719 270 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 PTPN7P35236 360 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 SP140Q13342 867 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 MRPL49Q13405 166 aaKnown RBP4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 NFIXQ14938 502 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 ACAP1Q15027 740 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 MLC1Q15049 377 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 ATP2B3Q16720 1220 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 HS1BP3Q53T59 392 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 FAM47AQ5JRC9 791 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 CCDC181Q5TID7 509 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 TTLL10Q6ZVT0 673 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 POLNQ7Z5Q5 900 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 RSPH3Q86UC2 560 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 RHOT1Q8IXI2 618 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 DRC7Q8IY82 874 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 GPR135Q8IZ08 494 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 PRR18Q8N4B5 295 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 CASKIN2Q8WXE0 1202 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 RELTQ969Z4 430 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 C1GALT1C1Q96EU7 318 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 MAP3K14Q99558 947 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 PLA2G12BQ9BX93 195 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 SENP6Q9GZR1 1112 aaPredicted RBP4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 AGO3Q9H9G7 860 aaKnown RBP4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 NMRK2Q9NPI5 230 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 TDP1Q9NUW8 608 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 PLA2G3Q9NZ20 509 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 LIMCH1Q9UPQ0 1083 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 ZFR2Q9UPR6 939 aaKnown RBP4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 HDAC5Q9UQL6 1122 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 POLHQ9Y253 713 aa4.9□□□□□ -1.63
LSM1P1-201ENST00000438629 ERC2O15083 957 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 PRICKLE3O43900 615 aaPredicted RBP4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 ARIH2O95376 493 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 ITGB3P05106 788 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 SREBF1P36956 1147 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 FLT3LGP49771 235 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 CDC42EP1Q00587 391 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 SAFB2Q14151 953 aaKnown RBP eCLIP4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 RAB39AQ14964 217 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 SEPT2Q15019 361 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 GFOD2Q3B7J2 385 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 FBLN7Q53RD9 439 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 ATAT1Q5SQI0 421 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 FKBP15Q5T1M5 1219 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 TCTN3Q6NUS6 607 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 SPOCD1Q6ZMY3 1216 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 APBB1IPQ7Z5R6 666 aaPredicted RBP4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 FAM83AQ86UY5 434 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 TPH2Q8IWU9 490 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 ANKRD35Q8N283 1001 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 MAGEB6Q8N7X4 407 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 HPS3Q969F9 1004 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 GNRHR2Q96P88 292 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 OR14A2Q96R54 314 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 PTPN18Q99952 460 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 PDCD2LQ9BRP1 358 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 ADAM7Q9H2U9 754 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 KMT5AQ9NQR1 393 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 CALCOCO1Q9P1Z2 691 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 SERPINB13Q9UIV8 391 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 NOB1Q9ULX3 412 aaKnown RBP4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 SLC30A1Q9Y6M5 507 aa4.89□□□□□ -1.63
LSM1P1-201ENST00000438629 B5MCH6 92 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 KIF3BO15066 747 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 ADCY6O43306 1168 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 AP1G1O43747 822 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 IPO13O94829 963 aaKnown RBP4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 GNAT2P19087 354 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 LPOP22079 712 aaPredicted RBP4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 EDNRBP24530 442 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 DUSP8Q13202 625 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 LRRC41Q15345 812 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 PGS1Q32NB8 556 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 METTL24Q5JXM2 366 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms