RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 CNOT8Q9UFF9 292 aaKnown RBP13.1□□□□□ -0.31
CLDN4-203ENST00000435050 NOC2LQ9Y3T9 749 aaKnown RBP13.1□□□□□ -0.31
CLDN4-203ENST00000435050 GSTTP1A0A1W2PQM5 241 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 CTNNA2P26232 953 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 GJC2Q5T442 439 aaPredicted RBP13.09□□□□□ -0.31
CLDN4-203ENST00000435050 DCUN1D2Q6PH85 259 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 SV2AQ7L0J3 742 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 SLC47A2Q86VL8 602 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 DDX42Q86XP3 938 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLDN4-203ENST00000435050 TMEM161BQ8NDZ6 487 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 MAGOHBQ96A72 148 aaKnown RBP13.09□□□□□ -0.31
CLDN4-203ENST00000435050 C11orf70Q9BRQ4 267 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 FAM204AQ9H8W3 233 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 BTBD7Q9P203 1132 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 IGSF9BQ9UPX0 1349 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 RNF40O75150 1001 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 CETN2P41208 172 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 MAPK6Q16659 721 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 TPCN2Q8NHX9 752 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 AFAP1L1Q8TED9 768 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 CPA5Q8WXQ8 436 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 INPP4AQ96PE3 977 aaPredicted RBP13.09□□□□□ -0.31
CLDN4-203ENST00000435050 FAM49AQ9H0Q0 323 aaPredicted RBP13.09□□□□□ -0.31
CLDN4-203ENST00000435050 MMEP08473 750 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 MAPK4P31152 587 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 EPHX2P34913 555 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 ATP1A2P50993 1020 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 CDR1P51861 262 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 GPC5P78333 572 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 TERF2Q15554 542 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 FAM76AQ8TAV0 307 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 NUP85Q9BW27 656 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 APOL6Q9BWW8 343 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 EFCC1Q9HA90 598 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 MTUS1Q9ULD2 1270 aa13.09□□□□□ -0.31
CLDN4-203ENST00000435050 ATP8B1O43520 1251 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 OPA1O60313 960 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 UBA1P22314 1058 aaKnown RBP13.08□□□□□ -0.32
CLDN4-203ENST00000435050 CARSP49589 748 aaKnown RBP13.08□□□□□ -0.32
CLDN4-203ENST00000435050 ZNF131P52739 623 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 PLVAPQ9BX97 442 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 ANAPC7Q9UJX3 599 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 LIN9Q5TKA1 542 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 GSTA5Q7RTV2 222 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 MSANTD4Q8NCY6 345 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 PRPF31Q8WWY3 499 aaKnown RBP13.08□□□□□ -0.32
CLDN4-203ENST00000435050 ZBTB10Q96DT7 871 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 CDCA5Q96FF9 252 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 PBKQ96KB5 322 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 TIPINQ9BVW5 301 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 KCNG1Q9UIX4 513 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 LRRIQ3A6PVS8 624 aaPredicted RBP13.08□□□□□ -0.32
CLDN4-203ENST00000435050 MYO1FO00160 1098 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 HLA-DRAP01903 254 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 GGCXP38435 758 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 CLCN3P51790 818 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 Q3C1V9 767 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 ZNF568Q3ZCX4 644 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 KAZNQ674X7 775 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 PALB2Q86YC2 1186 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 LNX1Q8TBB1 728 aaPredicted RBP13.08□□□□□ -0.32
CLDN4-203ENST00000435050 ARHGEF26Q96DR7 871 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 RASAL2Q9UJF2 1139 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 CEP83Q9Y592 693 aa13.08□□□□□ -0.32
CLDN4-203ENST00000435050 PFASO15067 1338 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 KCNA2P16389 499 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 SF3A3Q12874 501 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLDN4-203ENST00000435050 CCNI2Q6ZMN8 369 aaPredicted RBP13.07□□□□□ -0.32
CLDN4-203ENST00000435050 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.07□□□□□ -0.322e-7■■■□□ 16
CLDN4-203ENST00000435050 NAP1L3Q99457 506 aaPredicted RBP13.07□□□□□ -0.32
CLDN4-203ENST00000435050 CELF4Q9BZC1 486 aaKnown RBP13.07□□□□□ -0.32
CLDN4-203ENST00000435050 TMEM8AQ9HCN3 771 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 AFG3L2Q9Y4W6 797 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 SNCAIPQ9Y6H5 919 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 ZMYM2Q9UBW7 1377 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 ANKRD62A6NC57 917 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 GOLGA8SH3BPF8 625 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 GJB1P08034 283 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 EPHB4P54760 987 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 NLRP11P59045 1033 aaKnown RBP13.07□□□□□ -0.32
CLDN4-203ENST00000435050 GTF2BQ00403 316 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 CEP85LQ5SZL2 805 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 RDM1Q8NG50 284 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 ZNF564Q8TBZ8 553 aaPredicted RBP13.07□□□□□ -0.32
CLDN4-203ENST00000435050 PARD3BQ8TEW8 1205 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 ASIC3Q9UHC3 531 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 GTPBP10A4D1E9 387 aaKnown RBP13.07□□□□□ -0.32
CLDN4-203ENST00000435050 OAZ1P54368 228 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 CCNA1P78396 465 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 SLFN12LQ6IEE8 588 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 ASAP3Q8TDY4 903 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 NLRP7Q8WX94 980 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 RNF14Q9UBS8 474 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 L1RE1Q9UN81 338 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 DLEC1Q9Y238 1755 aa13.07□□□□□ -0.32
CLDN4-203ENST00000435050 PJA2O43164 708 aa13.06□□□□□ -0.32
CLDN4-203ENST00000435050 RAD51CO43502 376 aa13.06□□□□□ -0.32
CLDN4-203ENST00000435050 MYBL2P10244 700 aa13.06□□□□□ -0.32
CLDN4-203ENST00000435050 SP2Q02086 613 aa13.06□□□□□ -0.32
CLDN4-203ENST00000435050 TRIP13Q15645 432 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms