RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 PDE2AO00408 941 aaPredicted RBP8.09□□□□□ -1.11
COL17A1-204ENST00000433822 EML1O00423 815 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 ENC1O14682 589 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 TGFB1I1O43294 461 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 GAS7O60861 476 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 AKAP3O75969 853 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 MOCS3O95396 460 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 RHOXF2BP0C7M4 288 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 RPS12P25398 132 aaKnown RBP8.09□□□□□ -1.11
COL17A1-204ENST00000433822 ABCD1P33897 745 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 GATA4P43694 442 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 CASP5P51878 434 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 HADHBP55084 474 aaKnown RBP8.09□□□□□ -1.11
COL17A1-204ENST00000433822 PSMC6P62333 389 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 GFPT1Q06210 699 aaPredicted RBP8.09□□□□□ -1.11
COL17A1-204ENST00000433822 TNFAIP1Q13829 316 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 RASA3Q14644 834 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 TNIP1Q15025 636 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 PPP2R5EQ16537 467 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 USH1GQ495M9 461 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 ZNF720Q7Z2F6 126 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 SLFN11Q7Z7L1 901 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 NELFCDQ8IXH7 590 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 SYCE1Q8N0S2 351 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 BANK1Q8NDB2 785 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 AENQ8WTP8 325 aaKnown RBP8.09□□□□□ -1.11
COL17A1-204ENST00000433822 EEF2KMTQ96G04 330 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 INPP4AQ96PE3 977 aaPredicted RBP8.09□□□□□ -1.11
COL17A1-204ENST00000433822 SPAG5Q96R06 1193 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 IWS1Q96ST2 819 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 RHOXF2Q9BQY4 288 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 WDR18Q9BV38 432 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 RUSC1Q9BVN2 902 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 KIAA1683Q9H0B3 1180 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 TMEM206Q9H813 350 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 ETNK1Q9HBU6 452 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 SIX2Q9NPC8 291 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 LARSQ9P2J5 1176 aaKnown RBP8.09□□□□□ -1.11
COL17A1-204ENST00000433822 HDAC6Q9UBN7 1215 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 TMEM59LQ9UK28 342 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 ADAM21Q9UKJ8 722 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 TTC7AQ9ULT0 858 aaPredicted RBP8.09□□□□□ -1.11
COL17A1-204ENST00000433822 HPCAL4Q9UM19 191 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 DIS3Q9Y2L1 958 aaKnown RBP8.09□□□□□ -1.11
COL17A1-204ENST00000433822 DUSP10Q9Y6W6 482 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 MYH11P35749 1972 aa8.09□□□□□ -1.11
COL17A1-204ENST00000433822 ZMYM2Q9UBW7 1377 aa8.09□□□□□ -1.12
COL17A1-204ENST00000433822 NCANO14594 1321 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 PASKQ96RG2 1323 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 A0A087X0T9 212 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 NPHP3-ACAD11A0A0J9YXS1 232 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 H3BQF6 201 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 CCDC188H7C350 402 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 IPO5O00410 1097 aaKnown RBP8.08□□□□□ -1.12
COL17A1-204ENST00000433822 ATXN7O15265 892 aaPredicted RBP8.08□□□□□ -1.12
COL17A1-204ENST00000433822 MAFGO15525 162 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 GPR37L1O60883 481 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 GCNT3O95395 438 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 P4HBP07237 508 aaKnown RBP8.08□□□□□ -1.12
COL17A1-204ENST00000433822 FAM228BP0C875 321 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 MYBP10242 640 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 LMNB1P20700 586 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 STAT1P42224 750 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 ECE1P42892 770 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 RAPGEF1Q13905 1077 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 KIAA0753Q2KHM9 967 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 SHROOM1Q2M3G4 852 aaPredicted RBP8.08□□□□□ -1.12
COL17A1-204ENST00000433822 CCDC181Q5TID7 509 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 ALS2CLQ60I27 953 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 PCNX4Q63HM2 1172 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 LDHDQ86WU2 507 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 FAM178BQ8IXR5 827 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 PRPF38AQ8NAV1 312 aaKnown RBP8.08□□□□□ -1.12
COL17A1-204ENST00000433822 ACTRT1Q8TDG2 376 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 ACER1Q8TDN7 264 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 TBC1D5Q92609 795 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 ZNF577Q9BSK1 485 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 SYT11Q9BT88 431 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 STK33Q9BYT3 514 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 MLXIPQ9HAP2 919 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 NLRC4Q9NPP4 1024 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 TBC1D22BQ9NU19 505 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 STIM2Q9P246 746 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 NAGPAQ9UK23 515 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 ZNRF3Q9ULT6 936 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 UBIAD1Q9Y5Z9 338 aa8.08□□□□□ -1.12
COL17A1-204ENST00000433822 SMCHD1A6NHR9 2005 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 TRPM7Q96QT4 1865 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 LRRIQ3A6PVS8 624 aaPredicted RBP8.07□□□□□ -1.12
COL17A1-204ENST00000433822 DKC1O60832 514 aaKnown RBP eCLIP8.07□□□□□ -1.12
COL17A1-204ENST00000433822 SRGAP2O75044 1071 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 PRPF6O94906 941 aaKnown RBP8.07□□□□□ -1.12
COL17A1-204ENST00000433822 CFBP00751 764 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 KLRC1P26715 233 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 HOXA13P31271 388 aaPredicted RBP8.07□□□□□ -1.12
COL17A1-204ENST00000433822 SFNP31947 248 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 SOX5P35711 763 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 FMO5P49326 533 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 OAZ1P54368 228 aa8.07□□□□□ -1.12
COL17A1-204ENST00000433822 ZNF280AP59817 542 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms