RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 RNF207Q6ZRF8 634 aa4.58□□□□□ -1.68
LINC01239-201ENST00000433645 GPRIN1Q7Z2K8 1008 aa4.58□□□□□ -1.68
LINC01239-201ENST00000433645 ZNF572Q7Z3I7 529 aaPredicted RBP4.58□□□□□ -1.68
LINC01239-201ENST00000433645 RPUSD2Q8IZ73 545 aaKnown RBP4.58□□□□□ -1.68
LINC01239-201ENST00000433645 OR52N2Q8NGI0 321 aa4.58□□□□□ -1.68
LINC01239-201ENST00000433645 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.58□□□□□ -1.68
LINC01239-201ENST00000433645 CASKIN2Q8WXE0 1202 aa4.58□□□□□ -1.68
LINC01239-201ENST00000433645 MTMR8Q96EF0 704 aa4.58□□□□□ -1.68
LINC01239-201ENST00000433645 FUBP3Q96I24 572 aaKnown RBP eCLIP4.58□□□□□ -1.68
LINC01239-201ENST00000433645 XDHP47989 1333 aa4.57□□□□□ -1.68
LINC01239-201ENST00000433645 HSP90B1P14625 803 aaKnown RBP4.57□□□□□ -1.68
LINC01239-201ENST00000433645 IL2RBP14784 551 aa4.57□□□□□ -1.68
LINC01239-201ENST00000433645 IARSP41252 1262 aaKnown RBP4.57□□□□□ -1.68
LINC01239-201ENST00000433645 ANAPC15P60006 121 aa4.57□□□□□ -1.68
LINC01239-201ENST00000433645 RRP1BQ14684 758 aaKnown RBP4.57□□□□□ -1.68
LINC01239-201ENST00000433645 MIIPQ5JXC2 388 aa4.57□□□□□ -1.68
LINC01239-201ENST00000433645 Q6ZVL8 140 aa4.57□□□□□ -1.68
LINC01239-201ENST00000433645 PALM2Q8IXS6 379 aa4.57□□□□□ -1.68
LINC01239-201ENST00000433645 SH3RF3Q8TEJ3 882 aaPredicted RBP4.57□□□□□ -1.68
LINC01239-201ENST00000433645 JADE3Q92613 823 aa4.57□□□□□ -1.68
LINC01239-201ENST00000433645 ASPSCR1Q9BZE9 553 aa4.57□□□□□ -1.68
LINC01239-201ENST00000433645 PARPBPQ9NWS1 579 aa4.57□□□□□ -1.68
LINC01239-201ENST00000433645 SAP30BPQ9UHR5 308 aaKnown RBP4.57□□□□□ -1.68
LINC01239-201ENST00000433645 KLRG2A4D1S0 409 aaPredicted RBP4.56□□□□□ -1.68
LINC01239-201ENST00000433645 TBKBP1A7MCY6 615 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 PLSCR1O15162 318 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 MATN3O15232 486 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 TEX33O43247 280 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 STC2O76061 302 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 MYBL2P10244 700 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 OSMP13725 252 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 INSRRP14616 1297 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 GSPT1P15170 499 aaKnown RBP4.56□□□□□ -1.68
LINC01239-201ENST00000433645 TNFRSF1AP19438 455 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 MGAT1P26572 445 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 GUCY1A2P33402 732 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 SREBF1P36956 1147 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 SLC16A1P53985 500 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 IGBP1P78318 339 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 PTH1RQ03431 593 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 FOXE3Q13461 319 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 CNGB1Q14028 1251 aaPredicted RBP4.56□□□□□ -1.68
LINC01239-201ENST00000433645 VPS72Q15906 364 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 BMT2Q1RMZ1 405 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 USP39Q53GS9 565 aaKnown RBP4.56□□□□□ -1.68
LINC01239-201ENST00000433645 BRDTQ58F21 947 aaPredicted RBP4.56□□□□□ -1.68
LINC01239-201ENST00000433645 C1QL3Q5VWW1 255 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 C1orf210Q8IVY1 113 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 ELOA2Q8IYF1 753 aaPredicted RBP4.56□□□□□ -1.68
LINC01239-201ENST00000433645 TRMT2AQ8IZ69 625 aaKnown RBP4.56□□□□□ -1.68
LINC01239-201ENST00000433645 IL17DQ8TAD2 202 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 ATXN2LQ8WWM7 1075 aaKnown RBP4.56□□□□□ -1.68
LINC01239-201ENST00000433645 ZNF503Q96F45 646 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 MNTQ99583 582 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 CPPED1Q9BRF8 314 aaPredicted RBP4.56□□□□□ -1.68
LINC01239-201ENST00000433645 LSM14BQ9BX40 385 aaKnown RBP4.56□□□□□ -1.68
LINC01239-201ENST00000433645 GPR87Q9BY21 358 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 CCDC8Q9H0W5 538 aaPredicted RBP4.56□□□□□ -1.68
LINC01239-201ENST00000433645 MANSC1Q9H8J5 431 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 MOCS1Q9NZB8 636 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 HDAC5Q9UQL6 1122 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 PCDHGA2Q9Y5H1 932 aa4.56□□□□□ -1.68
LINC01239-201ENST00000433645 ATRNL1Q5VV63 1379 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 TNKSO95271 1327 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 PRR5-ARHGAP8B1AHC4 643 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 DIRC3C9JPN6 131 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 TRIM24O15164 1050 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 PCDHGA12O60330 932 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 NDUFS2O75306 463 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 PPFIA4O75335 1185 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 SNRPA1P09661 255 aaKnown RBP4.55□□□□□ -1.68
LINC01239-201ENST00000433645 ALOX15P16050 662 aaPredicted RBP4.55□□□□□ -1.68
LINC01239-201ENST00000433645 SCNN1GP51170 649 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 ADKP55263 362 aaKnown RBP4.55□□□□□ -1.68
LINC01239-201ENST00000433645 EVA1CP58658 441 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 CRHR2Q13324 411 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 FAM50AQ14320 339 aaKnown RBP4.55□□□□□ -1.68
LINC01239-201ENST00000433645 CLUL1Q15846 466 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 ABCB5Q2M3G0 1257 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 TMEM240Q5SV17 173 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 PRAMEF14Q5SWL7 426 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 OTUD7BQ6GQQ9 843 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 Q6ZRM9 215 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 SPRED1Q7Z699 444 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 CACTINQ8WUQ7 758 aaKnown RBP4.55□□□□□ -1.68
LINC01239-201ENST00000433645 EXTL1Q92935 676 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 CHMP4CQ96CF2 233 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 KCNH6Q9H252 994 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 EPC1Q9H2F5 836 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 TCF7L1Q9HCS4 588 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 LANCL2Q9NS86 450 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 CEP72Q9P209 647 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 PCDHGA9Q9Y5G4 932 aaKnown RBP4.55□□□□□ -1.68
LINC01239-201ENST00000433645 PCDHGA8Q9Y5G5 932 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 PCDHGA7Q9Y5G6 932 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 PCDHGA6Q9Y5G7 932 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 PCDHGA3Q9Y5H0 932 aa4.55□□□□□ -1.68
LINC01239-201ENST00000433645 ZMYM3Q14202 1370 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms