RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 CEP70Q8NHQ1 597 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 SLC7A3Q8WY07 619 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 FAM149B1Q96BN6 582 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 COQ7Q99807 217 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 GRIP2Q9C0E4 1043 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 DPH5Q9H2P9 285 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 LZTFL1Q9NQ48 299 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 SLC39A1Q9NY26 324 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 EVLQ9UI08 416 aaPredicted RBP11.61□□□□□ -0.55
CCDC171-202ENST00000432954 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.61□□□□□ -0.55
CCDC171-202ENST00000432954 ADGRL2O95490 1459 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 PNMA6EA0A0J9YXQ4 647 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 ARHGAP10A1A4S6 786 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 OR6C65A6NJZ3 312 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 A8MX80 341 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 GOLGA8RI6L899 631 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 NDC80O14777 642 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 FOXP2O15409 715 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 RHOBTB3O94955 611 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 SERPINC1P01008 464 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 A1BGP04217 495 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 ATF6P18850 670 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 PTGS2P35354 604 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 C19orf57Q0VDD7 668 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 NPTX1Q15818 432 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 PPP6R3Q5H9R7 873 aaPredicted RBP11.61□□□□□ -0.55
CCDC171-202ENST00000432954 PEX26Q7Z412 305 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 FBXL16Q8N461 479 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 CSGALNACT2Q8N6G5 542 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 ESYT1Q9BSJ8 1104 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 ADNPQ9H2P0 1102 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 USP29Q9HBJ7 922 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 TAS2R7Q9NYW3 318 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 STK17AQ9UEE5 414 aa11.61□□□□□ -0.55
CCDC171-202ENST00000432954 DAPK1P53355 1430 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 NCAM2O15394 837 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 AQP9O43315 295 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 GNRH1P01148 92 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 PRLP01236 227 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 RASA1P20936 1047 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 GJB2P29033 226 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 SF3B4Q15427 424 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCDC171-202ENST00000432954 DIXDC1Q155Q3 683 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 NME9Q86XW9 330 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 SLC39A13Q96H72 371 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 NOX5Q96PH1 765 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 MMS19Q96T76 1030 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 TUBA1CQ9BQE3 449 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 DESI2Q9BSY9 194 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 APOL5Q9BWW9 433 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 CNOT10Q9H9A5 744 aaKnown RBP11.6□□□□□ -0.55
CCDC171-202ENST00000432954 AVENQ9NQS1 362 aaPredicted RBP11.6□□□□□ -0.55
CCDC171-202ENST00000432954 SAMD15Q9P1V8 674 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 PALD1Q9ULE6 856 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 PCDHA12Q9UN75 941 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 SOX13Q9UN79 622 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 CAPN6Q9Y6Q1 641 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 NUP155O75694 1391 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 MYO3BQ8WXR4 1341 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 ZNF335Q9H4Z2 1342 aaPredicted RBP11.6□□□□□ -0.55
CCDC171-202ENST00000432954 PHF20L1A8MW92 1017 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 H3BUI4 141 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 VILLO15195 856 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 NDUFA2O43678 99 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 NPM3O75607 178 aaKnown RBP11.6□□□□□ -0.55
CCDC171-202ENST00000432954 RSL1D1O76021 490 aaKnown RBP11.6□□□□□ -0.55
CCDC171-202ENST00000432954 ITGB3P05106 788 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 ALDH18A1P54886 795 aaKnown RBP11.6□□□□□ -0.55
CCDC171-202ENST00000432954 AP1B1Q10567 949 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 GRIK5Q16478 980 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 KCTD20Q7Z5Y7 419 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 GLRX5Q86SX6 157 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 GATAD2AQ86YP4 633 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 USHBP1Q8N6Y0 703 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 TTC17Q96AE7 1141 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 REXO5Q96IC2 774 aaKnown RBP11.6□□□□□ -0.55
CCDC171-202ENST00000432954 ZNF317Q96PQ6 595 aaPredicted RBP11.6□□□□□ -0.55
CCDC171-202ENST00000432954 TBCBQ99426 244 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 NELL2Q99435 816 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 TRIM8Q9BZR9 551 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 MARCH7Q9H992 704 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 SDHAF3Q9NRP4 125 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCDC171-202ENST00000432954 FNIP2Q9P278 1114 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 TNFRSF10DQ9UBN6 386 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 SLC8A2Q9UPR5 921 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 RABGAP1Q9Y3P9 1069 aa11.6□□□□□ -0.55
CCDC171-202ENST00000432954 PCF11O94913 1555 aaKnown RBP11.59□□□□□ -0.55
CCDC171-202ENST00000432954 TRIM77I1YAP6 450 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 ZMYND10O75800 440 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 ALX3O95076 343 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 SNRPAP09012 282 aaKnown RBP11.59□□□□□ -0.55
CCDC171-202ENST00000432954 TFPTP0C1Z6 253 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 OCM2P0CE71 109 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 OCMP0CE72 109 aaPredicted RBP11.59□□□□□ -0.55
CCDC171-202ENST00000432954 AXLP30530 894 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 ME1P48163 572 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 VPS41P49754 854 aa11.59□□□□□ -0.55
CCDC171-202ENST00000432954 FXR1P51114 621 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCDC171-202ENST00000432954 S100A12P80511 92 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms