RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 A0A0B4J269 797 aa19.86■□□□□ 0.77
HMGN1-206ENST00000431390 EXTL3O43909 919 aa19.86■□□□□ 0.77
HMGN1-206ENST00000431390 AFPP02771 609 aaKnown RBP19.86■□□□□ 0.77
HMGN1-206ENST00000431390 ATN1P54259 1190 aaPredicted RBP19.86■□□□□ 0.77
HMGN1-206ENST00000431390 KCNH2Q12809 1159 aa19.86■□□□□ 0.77
HMGN1-206ENST00000431390 BFSP1Q12934 665 aa19.86■□□□□ 0.77
HMGN1-206ENST00000431390 TBX2Q13207 712 aaPredicted RBP19.86■□□□□ 0.77
HMGN1-206ENST00000431390 PCBP1Q15365 356 aaKnown RBP eCLIP19.86■□□□□ 0.77
HMGN1-206ENST00000431390 SNRNP35Q16560 246 aaKnown RBP19.86■□□□□ 0.77
HMGN1-206ENST00000431390 FAM47CQ5HY64 1035 aa19.86■□□□□ 0.77
HMGN1-206ENST00000431390 CCDC186Q7Z3E2 898 aa19.86■□□□□ 0.77
HMGN1-206ENST00000431390 SLC35C1Q96A29 364 aa19.86■□□□□ 0.77
HMGN1-206ENST00000431390 GLT1D1Q96MS3 346 aa19.86■□□□□ 0.77
HMGN1-206ENST00000431390 PPP1R16BQ96T49 567 aa19.86■□□□□ 0.77
HMGN1-206ENST00000431390 AGO2Q9UKV8 859 aaKnown RBP19.86■□□□□ 0.77
HMGN1-206ENST00000431390 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.86■□□□□ 0.771e-14■■■□□ 15.4
HMGN1-206ENST00000431390 GRIN2DO15399 1336 aa19.86■□□□□ 0.77
HMGN1-206ENST00000431390 CUL9Q8IWT3 2517 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 IQCF3P0C7M6 154 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 PROZP22891 400 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 ITGA7Q13683 1181 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 TRIM14Q14142 442 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 AMHR2Q16671 573 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 PTPN21Q16825 1174 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 KIZQ2M2Z5 673 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 DCAF17Q5H9S7 520 aaPredicted RBP19.85■□□□□ 0.77
HMGN1-206ENST00000431390 RPAINQ86UA6 219 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 RDH13Q8NBN7 331 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 SAAL1Q96ER3 474 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 FAM161BQ96MY7 647 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 GUCD1Q96NT3 240 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 LBHD1Q9BQE6 289 aaPredicted RBP19.85■□□□□ 0.77
HMGN1-206ENST00000431390 TNFSF13BQ9Y275 285 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 USP20Q9Y2K6 914 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 CNTNAP2Q9UHC6 1331 aa19.85■□□□□ 0.77
HMGN1-206ENST00000431390 TTLL13PA6NNM8 815 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 KBTBD13C9JR72 458 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 CLDN3O15551 220 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 MCL1Q07820 350 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 ATF7IP2Q5U623 682 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 TCERG1LQ5VWI1 586 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 MPZL3Q6UWV2 235 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 RSPH3Q86UC2 560 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 SERINC5Q86VE9 423 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 CBWD2Q8IUF1 395 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 ZSWIM2Q8NEG5 633 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 ZBTB45Q96K62 511 aaPredicted RBP19.84■□□□□ 0.77
HMGN1-206ENST00000431390 MFSD14AQ96MC6 490 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 MSTO1Q9BUK6 570 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 HAPLN2Q9GZV7 340 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 PTPRHQ9HD43 1115 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 ANKFY1Q9P2R3 1169 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 PHF24Q9UPV7 400 aa19.84■□□□□ 0.77
HMGN1-206ENST00000431390 GOLGA8IPA6NC78 632 aa19.83■□□□□ 0.77
HMGN1-206ENST00000431390 GOLGA8JA6NMD2 632 aa19.83■□□□□ 0.77
HMGN1-206ENST00000431390 ABLIM1O14639 778 aa19.83■□□□□ 0.77
HMGN1-206ENST00000431390 ADRB2P07550 413 aa19.83■□□□□ 0.77
HMGN1-206ENST00000431390 MATR3P43243 847 aaKnown RBP eCLIP19.83■□□□□ 0.77
HMGN1-206ENST00000431390 VAMP7P51809 220 aa19.83■□□□□ 0.77
HMGN1-206ENST00000431390 SYCP1Q15431 976 aa19.83■□□□□ 0.77
HMGN1-206ENST00000431390 USP37Q86T82 979 aa19.83■□□□□ 0.77
HMGN1-206ENST00000431390 TMC2Q8TDI7 906 aa19.83■□□□□ 0.77
HMGN1-206ENST00000431390 VTI1AQ96AJ9 217 aa19.83■□□□□ 0.77
HMGN1-206ENST00000431390 IQCDQ96DY2 449 aa19.83■□□□□ 0.77
HMGN1-206ENST00000431390 COL25A1Q9BXS0 654 aaPredicted RBP19.83■□□□□ 0.77
HMGN1-206ENST00000431390 A0A1W2PQ45 241 aaPredicted RBP19.83■□□□□ 0.76
HMGN1-206ENST00000431390 A0A1W2PQY0 241 aa19.83■□□□□ 0.76
HMGN1-206ENST00000431390 ZNF233A6NK53 670 aa19.83■□□□□ 0.76
HMGN1-206ENST00000431390 DNM1LO00429 736 aa19.83■□□□□ 0.76
HMGN1-206ENST00000431390 ERLIN2O94905 339 aa19.83■□□□□ 0.76
HMGN1-206ENST00000431390 DARSP14868 501 aaKnown RBP19.83■□□□□ 0.76
HMGN1-206ENST00000431390 CRYBB1P53674 252 aaPredicted RBP19.83■□□□□ 0.76
HMGN1-206ENST00000431390 TMEM62Q0P6H9 643 aa19.83■□□□□ 0.76
HMGN1-206ENST00000431390 NOLC1Q14978 699 aaKnown RBP eCLIP19.83■□□□□ 0.763e-16■□□□□ 10.2
HMGN1-206ENST00000431390 CCDC150Q8NCX0 1101 aa19.83■□□□□ 0.76
HMGN1-206ENST00000431390 FAM213AQ9BRX8 229 aa19.83■□□□□ 0.76
HMGN1-206ENST00000431390 TCHPQ9BT92 498 aa19.83■□□□□ 0.76
HMGN1-206ENST00000431390 NUP58Q9BVL2 599 aa19.83■□□□□ 0.76
HMGN1-206ENST00000431390 SEZ6LQ9BYH1 1024 aa19.83■□□□□ 0.76
HMGN1-206ENST00000431390 SIK3Q9Y2K2 1263 aa19.83■□□□□ 0.76
HMGN1-206ENST00000431390 GTPBP10A4D1E9 387 aaKnown RBP19.82■□□□□ 0.76
HMGN1-206ENST00000431390 OGTO15294 1046 aa19.82■□□□□ 0.76
HMGN1-206ENST00000431390 B4GALT5O43286 388 aa19.82■□□□□ 0.76
HMGN1-206ENST00000431390 TPM1P09493 284 aa19.82■□□□□ 0.76
HMGN1-206ENST00000431390 EIF4BP23588 611 aaKnown RBP19.82■□□□□ 0.76
HMGN1-206ENST00000431390 LAMA2P24043 3122 aaKnown RBP19.82■□□□□ 0.76
HMGN1-206ENST00000431390 CYP24A1Q07973 514 aa19.82■□□□□ 0.76
HMGN1-206ENST00000431390 PTGISQ16647 500 aa19.82■□□□□ 0.76
HMGN1-206ENST00000431390 TMEM132AQ24JP5 1023 aa19.82■□□□□ 0.76
HMGN1-206ENST00000431390 FIGNQ5HY92 759 aa19.82■□□□□ 0.76
HMGN1-206ENST00000431390 PPFIBP1Q86W92 1011 aa19.82■□□□□ 0.76
HMGN1-206ENST00000431390 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.82■□□□□ 0.76
HMGN1-206ENST00000431390 SLC43A3Q8NBI5 491 aa19.82■□□□□ 0.76
HMGN1-206ENST00000431390 OSMRQ99650 979 aa19.82■□□□□ 0.76
HMGN1-206ENST00000431390 A0A0U1RQG5 324 aaPredicted RBP19.81■□□□□ 0.76
HMGN1-206ENST00000431390 M0QZ92 97 aa19.81■□□□□ 0.76
HMGN1-206ENST00000431390 STX10O60499 249 aa19.81■□□□□ 0.76
HMGN1-206ENST00000431390 TSPAN1O60635 241 aa19.81■□□□□ 0.76
HMGN1-206ENST00000431390 N4BP1O75113 896 aaKnown RBP19.81■□□□□ 0.76
HMGN1-206ENST00000431390 CSDE1O75534 798 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms