RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 ABLIM1O14639 778 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 OGTO15294 1046 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 TGFB1I1O43294 461 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 MGEA5O60502 916 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 CAVIN2O95810 425 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 FGBP02675 491 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 STAG3L1P0CL83 205 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 ACRP10323 421 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 NR2F2P24468 414 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 GRM5P41594 1212 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 MAGEA10P43363 369 aaPredicted RBP12.01□□□□□ -0.49
CHD4-202ENST00000430771 MLLT1Q03111 559 aaPredicted RBP12.01□□□□□ -0.49
CHD4-202ENST00000430771 ZBTB33Q86T24 672 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 CDR2LQ86X02 465 aaPredicted RBP12.01□□□□□ -0.49
CHD4-202ENST00000430771 GPD1LQ8N335 351 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 LINC01599Q8WXQ3 324 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 RSPH1Q8WYR4 309 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 PGBD4Q96DM1 585 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 CBWD1Q9BRT8 395 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 FUCA2Q9BTY2 467 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 CCDC94Q9BW85 323 aaPredicted RBP12.01□□□□□ -0.49
CHD4-202ENST00000430771 EIF2AQ9BY44 585 aaKnown RBP12.01□□□□□ -0.49
CHD4-202ENST00000430771 GZF1Q9H116 711 aaPredicted RBP12.01□□□□□ -0.49
CHD4-202ENST00000430771 DNAJC25Q9H1X3 360 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 ELAC1Q9H777 363 aaKnown RBP12.01□□□□□ -0.49
CHD4-202ENST00000430771 KIAA1586Q9HCI6 787 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 TOPORSQ9NS56 1045 aaPredicted RBP12.01□□□□□ -0.49
CHD4-202ENST00000430771 HSPBP1Q9NZL4 362 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 AGO2Q9UKV8 859 aaKnown RBP12.01□□□□□ -0.49
CHD4-202ENST00000430771 LRFN2Q9ULH4 789 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 USP20Q9Y2K6 914 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 IPPQ9Y573 584 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 PCDHB2Q9Y5E7 798 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 A0A0B4J269 797 aa12□□□□□ -0.49
CHD4-202ENST00000430771 A0A0U1RQF3 1178 aa12□□□□□ -0.49
CHD4-202ENST00000430771 TRIM49BA6NDI0 452 aa12□□□□□ -0.49
CHD4-202ENST00000430771 TISP43B9A030 160 aa12□□□□□ -0.49
CHD4-202ENST00000430771 C9IYK1 514 aa12□□□□□ -0.49
CHD4-202ENST00000430771 CETN3O15182 167 aa12□□□□□ -0.49
CHD4-202ENST00000430771 CLIC2O15247 247 aa12□□□□□ -0.49
CHD4-202ENST00000430771 HOXA2O43364 376 aa12□□□□□ -0.49
CHD4-202ENST00000430771 EXTL3O43909 919 aa12□□□□□ -0.49
CHD4-202ENST00000430771 EXOC3O60645 756 aa12□□□□□ -0.49
CHD4-202ENST00000430771 FGFR1OPO95684 399 aaKnown RBP12□□□□□ -0.49
CHD4-202ENST00000430771 ADSSP30520 456 aa12□□□□□ -0.49
CHD4-202ENST00000430771 CYP2J2P51589 502 aa12□□□□□ -0.49
CHD4-202ENST00000430771 YARSP54577 528 aaKnown RBP12□□□□□ -0.49
CHD4-202ENST00000430771 WDR5P61964 334 aaKnown RBP12□□□□□ -0.49
CHD4-202ENST00000430771 FKBP3Q00688 224 aaKnown RBP12□□□□□ -0.49
CHD4-202ENST00000430771 TPD52L1Q16890 204 aaPredicted RBP12□□□□□ -0.49
CHD4-202ENST00000430771 ANO6Q4KMQ2 910 aa12□□□□□ -0.49
CHD4-202ENST00000430771 UBXN11Q5T124 520 aa12□□□□□ -0.49
CHD4-202ENST00000430771 LRSAM1Q6UWE0 723 aa12□□□□□ -0.49
CHD4-202ENST00000430771 C11orf57Q6ZUT1 292 aaPredicted RBP12□□□□□ -0.49
CHD4-202ENST00000430771 ECHDC2Q86YB7 292 aa12□□□□□ -0.49
CHD4-202ENST00000430771 NPAS4Q8IUM7 802 aa12□□□□□ -0.49
CHD4-202ENST00000430771 SLC9A9Q8IVB4 645 aa12□□□□□ -0.49
CHD4-202ENST00000430771 XXYLT1Q8NBI6 393 aa12□□□□□ -0.49
CHD4-202ENST00000430771 NOC3LQ8WTT2 800 aaKnown RBP12□□□□□ -0.49
CHD4-202ENST00000430771 TMEM174Q8WUU8 243 aa12□□□□□ -0.49
CHD4-202ENST00000430771 HERVK_113Q902F9 699 aa12□□□□□ -0.49
CHD4-202ENST00000430771 ZBTB45Q96K62 511 aaPredicted RBP12□□□□□ -0.49
CHD4-202ENST00000430771 SLC9A7Q96T83 725 aa12□□□□□ -0.49
CHD4-202ENST00000430771 SEMA6BQ9H3T3 888 aa12□□□□□ -0.49
CHD4-202ENST00000430771 NXF3Q9H4D5 531 aaKnown RBP12□□□□□ -0.49
CHD4-202ENST00000430771 TMEM161AQ9NX61 479 aa12□□□□□ -0.49
CHD4-202ENST00000430771 FRMD4BQ9Y2L6 1034 aa12□□□□□ -0.49
CHD4-202ENST00000430771 PDCD11Q14690 1871 aaKnown RBP12□□□□□ -0.49
CHD4-202ENST00000430771 PTPRSQ13332 1948 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 TTC3P53804 2025 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 SLC16A3O15427 465 aaKnown RBP11.99□□□□□ -0.49
CHD4-202ENST00000430771 ZNF623O75123 536 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 EOMESO95936 686 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 CLTAP09496 248 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 EPB41P11171 864 aaKnown RBP11.99□□□□□ -0.49
CHD4-202ENST00000430771 ITGA4P13612 1032 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 IBSPP21815 317 aaPredicted RBP11.99□□□□□ -0.49
CHD4-202ENST00000430771 STX17P56962 302 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 ZNF445P59923 1031 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 POU5F1Q01860 360 aaKnown RBP11.99□□□□□ -0.49
CHD4-202ENST00000430771 PPP2R3AQ06190 1150 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 TCTN1Q2MV58 587 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 TMEM240Q5SV17 173 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 TTI2Q6NXR4 508 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 ZNF365Q70YC5 407 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 OTOP2Q7RTS6 562 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 USP37Q86T82 979 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 ZC3H3Q8IXZ2 948 aaKnown RBP11.99□□□□□ -0.49
CHD4-202ENST00000430771 THNSL1Q8IYQ7 743 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 CSGALNACT2Q8N6G5 542 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 RNF169Q8NCN4 708 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 VWCEQ96DN2 955 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 SAAL1Q96ER3 474 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 CEP63Q96MT8 703 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 ACAP3Q96P50 834 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 RPS6KC1Q96S38 1066 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 BPIFA3Q9BQP9 254 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.99□□□□□ -0.49
CHD4-202ENST00000430771 MKNK1Q9BUB5 465 aa11.99□□□□□ -0.49
CHD4-202ENST00000430771 APOL6Q9BWW8 343 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms