RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 ACKR2O00590 384 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 PTGESO14684 152 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 HIP1RO75146 1068 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 ALDH2P05091 517 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 SSBP05455 408 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMPD4-204ENST00000430682 EPCAMP16422 314 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 RAD51AP2Q09MP3 1159 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 PTPN14Q15678 1187 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 ZRSR1Q15695 479 aaKnown RBP13.82□□□□□ -0.2
SMPD4-204ENST00000430682 ZBTB8OSQ8IWT0 167 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 SLC22A17Q8WUG5 538 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 RSPH1Q8WYR4 309 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 PRIMPOLQ96LW4 560 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 CDCA3Q99618 268 aaPredicted RBP13.82□□□□□ -0.2
SMPD4-204ENST00000430682 TMEM175Q9BSA9 504 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 KANSL3Q9P2N6 904 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 PRKAG3Q9UGI9 489 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 DNM3Q9UQ16 869 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 FAN1Q9Y2M0 1017 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 GIT1Q9Y2X7 761 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 IRAK3Q9Y616 596 aa13.82□□□□□ -0.2
SMPD4-204ENST00000430682 NPHP3-ACAD11A0A0J9YXS1 232 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.81□□□□□ -0.2
SMPD4-204ENST00000430682 OR1G1P47890 313 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 NPTX2P47972 431 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 PEX3P56589 373 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 NCBP1Q09161 790 aaKnown RBP13.81□□□□□ -0.2
SMPD4-204ENST00000430682 PRPF4BQ13523 1007 aaKnown RBP13.81□□□□□ -0.2
SMPD4-204ENST00000430682 NAB2Q15742 525 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 MAPK6Q16659 721 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 TMEM119Q4V9L6 283 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 ARSHQ5FYA8 562 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 RNF168Q8IYW5 571 aaPredicted RBP13.81□□□□□ -0.2
SMPD4-204ENST00000430682 C12orf76Q8N812 135 aaPredicted RBP13.81□□□□□ -0.2
SMPD4-204ENST00000430682 DEPTORQ8TB45 409 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 KIFAP3Q92845 792 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 B3GALT6Q96L58 329 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 LRFN3Q9BTN0 628 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 RAB34Q9BZG1 259 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 TRIM6Q9C030 488 aaPredicted RBP13.81□□□□□ -0.2
SMPD4-204ENST00000430682 C2orf40Q9H1Z8 148 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 UBN1Q9NPG3 1134 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 FOXD4L1Q9NU39 408 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 PARP2Q9UGN5 583 aa13.81□□□□□ -0.2
SMPD4-204ENST00000430682 ANK1P16157 1881 aa13.8□□□□□ -0.2
SMPD4-204ENST00000430682 ZNF318Q5VUA4 2279 aa13.8□□□□□ -0.2
SMPD4-204ENST00000430682 DOCK8Q8NF50 2099 aa13.8□□□□□ -0.2
SMPD4-204ENST00000430682 VPS37CA5D8V6 355 aaPredicted RBP13.8□□□□□ -0.2
SMPD4-204ENST00000430682 MEFVO15553 781 aaPredicted RBP13.8□□□□□ -0.2
SMPD4-204ENST00000430682 CNPP09543 421 aaKnown RBP13.8□□□□□ -0.2
SMPD4-204ENST00000430682 WEE2P0C1S8 567 aa13.8□□□□□ -0.2
SMPD4-204ENST00000430682 SYT1P21579 422 aa13.8□□□□□ -0.2
SMPD4-204ENST00000430682 CA8P35219 290 aa13.8□□□□□ -0.2
SMPD4-204ENST00000430682 SLC12A3P55017 1021 aa13.8□□□□□ -0.2
SMPD4-204ENST00000430682 RESTQ13127 1097 aa13.8□□□□□ -0.2
SMPD4-204ENST00000430682 SF3A1Q15459 793 aaKnown RBP13.8□□□□□ -0.2
SMPD4-204ENST00000430682 ARL6IP4Q66PJ3 421 aaKnown RBP13.8□□□□□ -0.2
SMPD4-204ENST00000430682 USP49Q70CQ1 688 aa13.8□□□□□ -0.2
SMPD4-204ENST00000430682 CEP120Q8N960 986 aa13.8□□□□□ -0.2
SMPD4-204ENST00000430682 FAM193BQ96PV7 902 aaPredicted RBP13.8□□□□□ -0.2
SMPD4-204ENST00000430682 GPR62Q9BZJ7 368 aa13.8□□□□□ -0.2
SMPD4-204ENST00000430682 FAM50BQ9Y247 325 aa13.8□□□□□ -0.2
SMPD4-204ENST00000430682 CLIC4Q9Y696 253 aa13.8□□□□□ -0.2
SMPD4-204ENST00000430682 CCDC169A6NNP5 214 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 LOC730098B7Z3J9 87 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 ABLIM1O14639 778 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 N4BP3O15049 544 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 RECQL4O94761 1208 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 CACNB1Q02641 598 aaPredicted RBP13.79□□□□□ -0.2
SMPD4-204ENST00000430682 PPP2R5AQ15172 486 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 PTPAQ15257 358 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 KIAA0319Q5VV43 1072 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 CABP7Q86V35 215 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 RNF135Q8IUD6 432 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 SYT2Q8N9I0 419 aaPredicted RBP13.79□□□□□ -0.2
SMPD4-204ENST00000430682 ZBTB45Q96K62 511 aaPredicted RBP13.79□□□□□ -0.2
SMPD4-204ENST00000430682 IFT74Q96LB3 600 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 KLHL5Q96PQ7 755 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 ACO2Q99798 780 aaKnown RBP13.79□□□□□ -0.2
SMPD4-204ENST00000430682 PTPRHQ9HD43 1115 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 BLOC1S4Q9NUP1 217 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 ARHGAP28Q9P2N2 729 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 GDAQ9Y2T3 454 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 STK24Q9Y6E0 443 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 MUC6Q6W4X9 2439 aa13.79□□□□□ -0.2
SMPD4-204ENST00000430682 K7ERI5 159 aa13.78□□□□□ -0.2
SMPD4-204ENST00000430682 C2CD2LO14523 706 aa13.78□□□□□ -0.2
SMPD4-204ENST00000430682 SLC16A4O15374 487 aa13.78□□□□□ -0.2
SMPD4-204ENST00000430682 SOD2P04179 222 aa13.78□□□□□ -0.2
SMPD4-204ENST00000430682 PLA2G4BP0C869 781 aa13.78□□□□□ -0.2
SMPD4-204ENST00000430682 COL9A1P20849 921 aa13.78□□□□□ -0.2
SMPD4-204ENST00000430682 GUCY2CP25092 1073 aa13.78□□□□□ -0.2
SMPD4-204ENST00000430682 EFNA5P52803 228 aa13.78□□□□□ -0.2
SMPD4-204ENST00000430682 CBX2Q14781 532 aaPredicted RBP13.78□□□□□ -0.2
SMPD4-204ENST00000430682 KARSQ15046 597 aaKnown RBP13.78□□□□□ -0.2
SMPD4-204ENST00000430682 SPECC1Q5M775 1068 aa13.78□□□□□ -0.2
SMPD4-204ENST00000430682 ATF7IP2Q5U623 682 aa13.78□□□□□ -0.2
SMPD4-204ENST00000430682 BRAPQ7Z569 592 aa13.78□□□□□ -0.2
SMPD4-204ENST00000430682 TMEM130Q8N3G9 435 aa13.78□□□□□ -0.2
SMPD4-204ENST00000430682 HERC2P3Q9BVR0 1158 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms