RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 FAM84BQ96KN1 310 aaPredicted RBP11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 TRAPPC9Q96Q05 1148 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 ASIC3Q9UHC3 531 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 NHSL1Q5SYE7 1610 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 SRCAPQ6ZRS2 3230 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 EYA4O95677 639 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 ETS2P15036 469 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 TNFAIP3P21580 790 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 MARK3P27448 753 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 EVA1CP58658 441 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 IL9RQ01113 521 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 KCNA1Q09470 495 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 GIT2Q14161 759 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 ARHGAP44Q17R89 818 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 SBK1Q52WX2 424 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 TMEM63BQ5T3F8 832 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 HOMEZQ8IX15 550 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 ATL2Q8NHH9 583 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 GRAMD1AQ96CP6 724 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 BTBD6Q96KE9 485 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 ZSWIM1Q9BR11 485 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 ADAM33Q9BZ11 813 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 DNAJC12Q9UKB3 198 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 KIF13BQ9NQT8 1826 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 CAPN9O14815 690 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 ATMINO43313 823 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 LRRN2O75325 713 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 TJP3O95049 919 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 TTC4O95801 387 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 CYP1A1P04798 512 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 CYP19A1P11511 503 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 SKIP12755 728 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 COMTP21964 271 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 ANXA13P27216 316 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 KRT17Q04695 432 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 MOGSQ13724 837 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 KPNB1Q14974 876 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 CAVIN4Q5BKX8 364 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 SEL1L2Q5TEA6 688 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 ZNF746Q6NUN9 644 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 C4orf50Q6ZRC1 276 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 KBTBD2Q8IY47 623 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 ZNF444Q8N0Y2 327 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 UBL4BQ8N7F7 174 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 SLC20A1Q8WUM9 679 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 NDNQ99608 321 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 SPZ1Q9BXG8 430 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 CHCHD3Q9NX63 227 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 GRID1Q9ULK0 1009 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 FRMPD2Q68DX3 1309 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 A0A1W2PRG0 241 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 RASA4BC9J798 803 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 RASA4O43374 803 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 TOM1O60784 492 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 RFC4P35249 363 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 STAT3P40763 770 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 ACSBG2Q5FVE4 666 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 C12orf60Q5U649 245 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 RASIP1Q5U651 963 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 HHATQ5VTY9 493 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 RFX8Q6ZV50 586 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 SFR1Q86XK3 245 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 SYCP3Q8IZU3 236 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 CADM1Q9BY67 442 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 NINJ2Q9NZG7 142 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 TFCP2L1Q9NZI6 479 aa11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 DDX25Q9UHL0 483 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 SAP30BPQ9UHR5 308 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-209ENST00000429836 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 UBAP1LF5GYI3 381 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 MEIS1O00470 390 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 TBX10O75333 385 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 ECEL1O95672 775 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 NR3C1P04150 777 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 MCL1Q07820 350 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 DYNC1I2Q13409 638 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 KNOP1Q1ED39 458 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 POTEGQ6S5H5 508 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 POTEEQ6S8J3 1075 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 LRRC74BQ6ZQY2 392 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 CYFIP1Q7L576 1253 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 MTDHQ86UE4 582 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 C7orf43Q8WVR3 580 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 ATG4AQ8WYN0 398 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 C9orf72Q96LT7 481 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 STARD13Q9Y3M8 1113 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 LAMB1P07942 1786 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 CREB3O43889 395 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 DCTN3O75935 186 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 GSTA2P09210 222 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 SPATA31D3P0C874 917 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 PTPN4P29074 926 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 NEK3P51956 506 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 CDR2Q01850 454 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 SIX1Q15475 284 aaPredicted RBP11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 CNPY1Q3B7I2 92 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 RNF207Q6ZRF8 634 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 SPATA31D4Q6ZUB0 917 aa11.84□□□□□ -0.51
SEMA4D-209ENST00000429836 SLC13A5Q86YT5 568 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms