RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 PPP6R3Q5H9R7 873 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-204ENST00000429774 ZNF560Q96MR9 790 aa7.59□□□□□ -1.19
ATXN3-204ENST00000429774 UBN1Q9NPG3 1134 aa7.59□□□□□ -1.19
ATXN3-204ENST00000429774 TRPM3Q9HCF6 1732 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-204ENST00000429774 ITGB4P16144 1822 aa7.59□□□□□ -1.2
ATXN3-204ENST00000429774 ASAP2O43150 1006 aa7.59□□□□□ -1.2
ATXN3-204ENST00000429774 ALDH7A1P49419 539 aaKnown RBP7.59□□□□□ -1.2
ATXN3-204ENST00000429774 VEPH1Q14D04 833 aa7.59□□□□□ -1.2
ATXN3-204ENST00000429774 SNRNP35Q16560 246 aaKnown RBP7.59□□□□□ -1.2
ATXN3-204ENST00000429774 Q4G0T1 1027 aa7.59□□□□□ -1.2
ATXN3-204ENST00000429774 KRT39Q6A163 491 aa7.59□□□□□ -1.2
ATXN3-204ENST00000429774 GLB1LQ6UWU2 654 aa7.59□□□□□ -1.2
ATXN3-204ENST00000429774 METTL16Q86W50 562 aaKnown RBP7.59□□□□□ -1.2
ATXN3-204ENST00000429774 PPFIBP2Q8ND30 876 aa7.59□□□□□ -1.2
ATXN3-204ENST00000429774 TACO1Q9BSH4 297 aaKnown RBP7.59□□□□□ -1.2
ATXN3-204ENST00000429774 ZDHHC9Q9Y397 364 aa7.59□□□□□ -1.2
ATXN3-204ENST00000429774 LRRC53A6NM62 1247 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 NOL3O60936 208 aaKnown RBP7.58□□□□□ -1.2
ATXN3-204ENST00000429774 SRGAP2O75044 1071 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 SRGAP2BP0DMP2 458 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 SLC8A1P32418 973 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 GRIK4Q16099 956 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 FSCN1Q16658 493 aaKnown RBP7.58□□□□□ -1.2
ATXN3-204ENST00000429774 CYP2W1Q8TAV3 490 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 SCYL1Q96KG9 808 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 GBP5Q96PP8 586 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 PI4K2AQ9BTU6 479 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 RAB17Q9H0T7 212 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 MCF2LO15068 1137 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 PFDN1O60925 122 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 RGS7P49802 495 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 SF3A3Q12874 501 aaKnown RBP eCLIP7.58□□□□□ -1.2
ATXN3-204ENST00000429774 ZNF484Q5JVG2 852 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 USP49Q70CQ1 688 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 BBS5Q8N3I7 341 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 UHMK1Q8TAS1 419 aaKnown RBP7.58□□□□□ -1.2
ATXN3-204ENST00000429774 RAB3IL1Q8TBN0 382 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 SH3TC2Q8TF17 1288 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 C7orf25Q9BPX7 421 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 RANBP17Q9H2T7 1088 aaKnown RBP7.58□□□□□ -1.2
ATXN3-204ENST00000429774 RIOX1Q9H6W3 641 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 PLCB1Q9NQ66 1216 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 ABCF3Q9NUQ8 709 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 ADAM22Q9P0K1 906 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 STRCP1A6NGW2 1772 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 PEX10O60683 326 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 ZC3H11AO75152 810 aaKnown RBP eCLIP7.58□□□□□ -1.2
ATXN3-204ENST00000429774 KRT17Q04695 432 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 ZBTB16Q05516 673 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 C2orf54Q08AI8 447 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 DPYDQ12882 1025 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 BFSP2Q13515 415 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 WDR72Q3MJ13 1102 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 SLC35F6Q8N357 371 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 TTC30BQ8N4P2 665 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 DAGLBQ8NCG7 672 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 IFT122Q9HBG6 1241 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 CEP72Q9P209 647 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 BTAF1O14981 1849 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 CHD4Q14839 1912 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 TRAPPC3O43617 180 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 LRRC23Q53EV4 343 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-204ENST00000429774 FKBP1CQ5VVH2 108 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 PDCD6IPQ8WUM4 868 aaKnown RBP7.58□□□□□ -1.2
ATXN3-204ENST00000429774 TRAPPC12Q8WVT3 735 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 STMN2Q93045 179 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 BAZ2BQ9UIF8 2168 aaKnown RBP7.58□□□□□ -1.2
ATXN3-204ENST00000429774 TMEM150BA6NC51 233 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 CYP26A1O43174 497 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 RPA1P27694 616 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 SGO2Q562F6 1265 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 DENND2CQ68D51 928 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 VSTM4Q8IW00 320 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 CD99L2Q8TCZ2 262 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 MGARPQ8TDB4 240 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 CFAP36Q96G28 342 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 FAM163AQ96GL9 167 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-204ENST00000429774 L3MBTL3Q96JM7 780 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-204ENST00000429774 OSMRQ99650 979 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 MOSPD1Q9UJG1 213 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 ANAPC7Q9UJX3 599 aa7.58□□□□□ -1.2
ATXN3-204ENST00000429774 KDM3BQ7LBC6 1761 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 LRRD1A4D1F6 860 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 STRNO43815 780 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 SEC31AO94979 1220 aaKnown RBP7.57□□□□□ -1.2
ATXN3-204ENST00000429774 AKR1A1P14550 325 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 ATP5DP30049 168 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 EPHB1P54762 984 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 INHBEP58166 350 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 PSMC1P62191 440 aaKnown RBP7.57□□□□□ -1.2
ATXN3-204ENST00000429774 BTBD8Q5XKL5 378 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 LRP10Q7Z4F1 713 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 COPS5Q92905 334 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 SENP7Q9BQF6 1050 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 TRIM9Q9C026 710 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 TBX20Q9UMR3 447 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 PRG3Q9Y2Y8 225 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-204ENST00000429774 CRYBG1Q9Y4K1 1723 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 ITGB3P05106 788 aa7.57□□□□□ -1.2
ATXN3-204ENST00000429774 HOXA7P31268 230 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms