RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 BMP8BP34820 402 aa18.63■□□□□ 0.57
LINC00887-203ENST00000429578 MATR3P43243 847 aaKnown RBP eCLIP18.63■□□□□ 0.57
LINC00887-203ENST00000429578 MAGEA10P43363 369 aaPredicted RBP18.63■□□□□ 0.57
LINC00887-203ENST00000429578 MCL1Q07820 350 aa18.63■□□□□ 0.57
LINC00887-203ENST00000429578 HSP90AA4PQ58FG1 418 aa18.63■□□□□ 0.57
LINC00887-203ENST00000429578 NOTUMQ6P988 496 aa18.63■□□□□ 0.57
LINC00887-203ENST00000429578 MKNK1Q9BUB5 465 aa18.63■□□□□ 0.57
LINC00887-203ENST00000429578 OSBPL7Q9BZF2 842 aa18.63■□□□□ 0.57
LINC00887-203ENST00000429578 PDZD7Q9H5P4 517 aa18.63■□□□□ 0.57
LINC00887-203ENST00000429578 AGO3Q9H9G7 860 aaKnown RBP18.63■□□□□ 0.57
LINC00887-203ENST00000429578 ST3GAL5Q9UNP4 418 aa18.63■□□□□ 0.57
LINC00887-203ENST00000429578 TRIOBPQ9H2D6 2365 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 N4BP3O15049 544 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 AKAP3O75969 853 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 GNA14O95837 355 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 CASP4P49662 377 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 MBTPS1Q14703 1052 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 NOLC1Q14978 699 aaKnown RBP eCLIP18.62■□□□□ 0.57
LINC00887-203ENST00000429578 ZNF568Q3ZCX4 644 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 EEF1DP3Q658K8 133 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 CEP135Q66GS9 1140 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 CDR2LQ86X02 465 aaPredicted RBP18.62■□□□□ 0.57
LINC00887-203ENST00000429578 MSTO1Q9BUK6 570 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 GRPEL1Q9HAV7 217 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 TMEM39AQ9NV64 488 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 AGO2Q9UKV8 859 aaKnown RBP18.62■□□□□ 0.57
LINC00887-203ENST00000429578 PADI3Q9ULW8 664 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 PIN4Q9Y237 131 aaKnown RBP18.62■□□□□ 0.57
LINC00887-203ENST00000429578 FRMD4BQ9Y2L6 1034 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 RALGAPA2Q2PPJ7 1873 aa18.62■□□□□ 0.57
LINC00887-203ENST00000429578 PDCD11Q14690 1871 aaKnown RBP18.61■□□□□ 0.57
LINC00887-203ENST00000429578 SLC16A3O15427 465 aaKnown RBP18.61■□□□□ 0.57
LINC00887-203ENST00000429578 LDHAP00338 332 aaKnown RBP18.61■□□□□ 0.57
LINC00887-203ENST00000429578 ATP1A3P13637 1013 aa18.61■□□□□ 0.57
LINC00887-203ENST00000429578 CDK11BP21127 795 aaKnown RBP18.61■□□□□ 0.57
LINC00887-203ENST00000429578 EEF1GP26641 437 aaKnown RBP18.61■□□□□ 0.57
LINC00887-203ENST00000429578 PSMC2P35998 433 aaKnown RBP18.61■□□□□ 0.57
LINC00887-203ENST00000429578 SPAG1Q07617 926 aa18.61■□□□□ 0.57
LINC00887-203ENST00000429578 NFX1Q12986 1120 aaKnown RBP18.61■□□□□ 0.57
LINC00887-203ENST00000429578 PAK2Q13177 524 aa18.61■□□□□ 0.57
LINC00887-203ENST00000429578 TCP11X2Q5H9J9 407 aa18.61■□□□□ 0.57
LINC00887-203ENST00000429578 ZBTB33Q86T24 672 aa18.61■□□□□ 0.57
LINC00887-203ENST00000429578 GPD1LQ8N335 351 aa18.61■□□□□ 0.57
LINC00887-203ENST00000429578 CNOT6LQ96LI5 555 aaKnown RBP18.61■□□□□ 0.57
LINC00887-203ENST00000429578 FBXL18Q96ME1 805 aa18.61■□□□□ 0.57
LINC00887-203ENST00000429578 ADPGKQ9BRR6 497 aa18.61■□□□□ 0.57
LINC00887-203ENST00000429578 ERVK-5Q9HDB9 667 aa18.61■□□□□ 0.57
LINC00887-203ENST00000429578 CHST12Q9NRB3 414 aa18.61■□□□□ 0.57
LINC00887-203ENST00000429578 MAGEC2Q9UBF1 373 aaPredicted RBP18.61■□□□□ 0.57
LINC00887-203ENST00000429578 UMODL1Q5DID0 1318 aa18.61■□□□□ 0.57
LINC00887-203ENST00000429578 KCNJ18B7U540 433 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 EXTL3O43909 919 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 PARNO95453 639 aaKnown RBP18.6■□□□□ 0.57
LINC00887-203ENST00000429578 MCF2P10911 925 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 EPB41P11171 864 aaKnown RBP18.6■□□□□ 0.57
LINC00887-203ENST00000429578 CD52P31358 61 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 MARSP56192 900 aaKnown RBP18.6■□□□□ 0.57
LINC00887-203ENST00000429578 KCNJ12Q14500 433 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 HSP90AA2PQ14568 343 aaPredicted RBP18.6■□□□□ 0.57
LINC00887-203ENST00000429578 SLC27A1Q6PCB7 646 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 SAAL1Q96ER3 474 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 CCDC51Q96ER9 411 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 CDT1Q9H211 546 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 KIAA1586Q9HCI6 787 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 MAPK13O15264 365 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 OGTO15294 1046 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 FAM189A1O60320 539 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 APBB1IPQ7Z5R6 666 aaPredicted RBP18.6■□□□□ 0.57
LINC00887-203ENST00000429578 FRMD5Q7Z6J6 570 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 ZSWIM2Q8NEG5 633 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 PPP1R12CQ9BZL4 782 aa18.6■□□□□ 0.57
LINC00887-203ENST00000429578 MICAL3Q7RTP6 2002 aa18.59■□□□□ 0.57
LINC00887-203ENST00000429578 GOLGA8IPA6NC78 632 aa18.59■□□□□ 0.57
LINC00887-203ENST00000429578 GOLGA8JA6NMD2 632 aa18.59■□□□□ 0.57
LINC00887-203ENST00000429578 HARSP12081 509 aaKnown RBP18.59■□□□□ 0.57
LINC00887-203ENST00000429578 SNRNP35Q16560 246 aaKnown RBP18.59■□□□□ 0.57
LINC00887-203ENST00000429578 DCAF4L1Q3SXM0 396 aa18.59■□□□□ 0.57
LINC00887-203ENST00000429578 CCDC40Q4G0X9 1142 aa18.59■□□□□ 0.57
LINC00887-203ENST00000429578 CREBRFQ8IUR6 639 aa18.59■□□□□ 0.57
LINC00887-203ENST00000429578 FAM186BQ8IYM0 893 aa18.59■□□□□ 0.57
LINC00887-203ENST00000429578 RDH13Q8NBN7 331 aa18.59■□□□□ 0.57
LINC00887-203ENST00000429578 ANKRD20A12PQ8NF67 263 aa18.59■□□□□ 0.57
LINC00887-203ENST00000429578 FAM213AQ9BRX8 229 aa18.59■□□□□ 0.57
LINC00887-203ENST00000429578 IFIH1Q9BYX4 1025 aaKnown RBP18.59■□□□□ 0.57
LINC00887-203ENST00000429578 UBE2OQ9C0C9 1292 aaKnown RBP18.59■□□□□ 0.57
LINC00887-203ENST00000429578 WNT8AQ9H1J5 351 aa18.59■□□□□ 0.57
LINC00887-203ENST00000429578 METTL14Q9HCE5 456 aaKnown RBP18.59■□□□□ 0.57
LINC00887-203ENST00000429578 KIAA0355O15063 1070 aa18.58■□□□□ 0.57
LINC00887-203ENST00000429578 NBNO60934 754 aa18.58■□□□□ 0.57
LINC00887-203ENST00000429578 ACOT2P49753 483 aa18.58■□□□□ 0.57
LINC00887-203ENST00000429578 MRE11P49959 708 aa18.58■□□□□ 0.57
LINC00887-203ENST00000429578 GPNMBQ14956 572 aa18.58■□□□□ 0.57
LINC00887-203ENST00000429578 CRELD2Q6UXH1 353 aaPredicted RBP18.58■□□□□ 0.57
LINC00887-203ENST00000429578 CBWD2Q8IUF1 395 aa18.58■□□□□ 0.57
LINC00887-203ENST00000429578 BORCS6Q96GS4 357 aa18.58■□□□□ 0.57
LINC00887-203ENST00000429578 PRKAG2Q9UGJ0 569 aa18.58■□□□□ 0.57
LINC00887-203ENST00000429578 ARMCX3Q9UH62 379 aaPredicted RBP18.58■□□□□ 0.57
LINC00887-203ENST00000429578 LIMA1Q9UHB6 759 aaKnown RBP18.58■□□□□ 0.57
LINC00887-203ENST00000429578 LRRC10BA6NIK2 292 aa18.57■□□□□ 0.56
LINC00887-203ENST00000429578 ZNF233A6NK53 670 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms