RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 DNM1LO00429 736 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 PDXKO00764 312 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 EIF3DO15371 548 aaKnown RBP eCLIP10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 MAGEB2O15479 319 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 ZEB2O60315 1214 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 CKBP12277 381 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 EIF4BP23588 611 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 COPB1P53618 953 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 ADKP55263 362 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 PRMT2P55345 433 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 PPP3CAQ08209 521 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 SNRNP35Q16560 246 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 ZNF568Q3ZCX4 644 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 ATF7IP2Q5U623 682 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 TMC6Q7Z403 805 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 FAM186BQ8IYM0 893 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 ARRDC4Q8NCT1 418 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 TCP11Q8WWU5 503 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 NOC4LQ9BVI4 516 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 FZD8Q9H461 694 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 FAM207AQ9NSI2 230 aaPredicted RBP10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 AJAP1Q9UKB5 411 aaPredicted RBP10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 MUC3AQ02505 3323 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 RRN3P2A6NIE6 340 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 ARVCFO00192 962 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 CLDN3O15551 220 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 ERLIN2O94905 339 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 NPTXRO95502 500 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 DARSP14868 501 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 UBXN1Q04323 297 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 HS2ST1Q7LGA3 356 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 ZNF516Q92618 1163 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 ZFP42Q96MM3 310 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 TSG101Q99816 390 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 CELF4Q9BZC1 486 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 CDT1Q9H211 546 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 KCNF1Q9H3M0 494 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 HCSTQ9UBK5 93 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 AGO2Q9UKV8 859 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 ST3GAL5Q9UNP4 418 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 PLAGL2Q9UPG8 496 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 PHF24Q9UPV7 400 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 BICDL2A1A5D9 508 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 CETN3O15182 167 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 FAM189A1O60320 539 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 SYN1P17600 705 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 SLC9A1P19634 815 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 PHKA2P46019 1235 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 MRPS6P82932 125 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 LRRC63Q05C16 580 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 FAAP100Q0VG06 881 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 ENOX2Q16206 610 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 TRIM71Q2Q1W2 868 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 TRAF7Q6Q0C0 670 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 SLC39A5Q6ZMH5 540 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 ZBTB8OSQ8IWT0 167 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 FAM126BQ8IXS8 530 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 C17orf53Q8N3J3 647 aaPredicted RBP10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 OR5B17Q8NGF7 314 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 SLC35C1Q96A29 364 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 PRIMPOLQ96LW4 560 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 GOLGA2P5Q9HBQ8 144 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 SNTG2Q9NY99 539 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 COL1A2P08123 1366 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 MOXD2PA6NHM9 499 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 ACKR2O00590 384 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 CALUO43852 315 aaPredicted RBP10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 GJA8P48165 433 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 RTP1P59025 263 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 KCNH2Q12809 1159 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 LPIN1Q14693 890 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 PPP2R5AQ15172 486 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 SPOPLQ6IQ16 392 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 DNAAF5Q86Y56 855 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 KCTD17Q8N5Z5 321 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 MYRIPQ8NFW9 859 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 KIAA1524Q8TCG1 905 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 ARMC5Q96C12 935 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 BORCS6Q96GS4 357 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 TMX1Q9H3N1 280 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 ACP6Q9NPH0 428 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 DMAC2Q9NW81 257 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 PADI3Q9ULW8 664 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 PHLPP2Q6ZVD8 1323 aa10.37□□□□□ -0.75
HMGCLL1-206ENST00000428842 A0A0B4J269 797 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 A0A0U1RQG5 324 aaPredicted RBP10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 GOLGA6L6A8MZA4 724 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 F8W810 466 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 NBNO60934 754 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 CLSTN1O94985 981 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 CDK7P50613 346 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 NKX3-2P78367 333 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 NR1I3Q14994 352 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 SYCP1Q15431 976 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 XXYLT1Q8NBI6 393 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 KAT5Q92993 513 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 CRISPLD2Q9H0B8 497 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 WNT8AQ9H1J5 351 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 NDST4Q9H3R1 872 aa10.36□□□□□ -0.75
HMGCLL1-206ENST00000428842 PTPRHQ9HD43 1115 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms