RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 RAB20Q9NX57 234 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 NENFQ9UMX5 172 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 CCDC151A5D8V7 595 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 EXTL3O43909 919 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 MAFO75444 373 aaPredicted RBP11.25□□□□□ -0.61
HDAC9-210ENST00000428307 SGPL1O95470 568 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 ADORA2AP29274 412 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 PRPF4BQ13523 1007 aaKnown RBP11.25□□□□□ -0.61
HDAC9-210ENST00000428307 KIF22Q14807 665 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 MEI1Q5TIA1 1274 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 TAF3Q5VWG9 929 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 ARMCX2Q7L311 632 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 SPATA4Q8NEY3 305 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 PSPC1Q8WXF1 523 aaKnown RBP11.25□□□□□ -0.61
HDAC9-210ENST00000428307 BRI3BPQ8WY22 251 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 ZNF516Q92618 1163 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 TATDN2Q93075 761 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 FNBP1Q96RU3 617 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 AGPAT1Q99943 283 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 OSGEPQ9NPF4 335 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 TRPC6Q9Y210 931 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 MYH10P35580 1976 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 PMM2O15305 246 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 GRIN3BO60391 1043 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 GJB1P08034 283 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 CETPP11597 493 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-210ENST00000428307 TTLL4Q14679 1199 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 BRD3Q15059 726 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 SLC47A2Q86VL8 602 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 FMNL3Q8IVF7 1028 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 TPCN2Q8NHX9 752 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 ATP8B4Q8TF62 1192 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 BBXQ8WY36 941 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-210ENST00000428307 DHX38Q92620 1227 aaKnown RBP11.24□□□□□ -0.61
HDAC9-210ENST00000428307 RPGRIP1Q96KN7 1286 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 TCHPQ9BT92 498 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 MSTO1Q9BUK6 570 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 ABCB6Q9NP58 842 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 RAB21Q9UL25 225 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 COQ4Q9Y3A0 265 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 PAPPA2Q9BXP8 1791 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 BTNL10A8MVZ5 291 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 ZBTB42B2RXF5 422 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 ADCY3O60266 1144 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 SASH3O75995 380 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 TBC1D8O95759 1140 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 PAFAH1B1P43034 410 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 GPC3P51654 580 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 MFAP3P55082 362 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 LAMTOR4Q0VGL1 99 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 PLCB4Q15147 1175 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 LONRF2Q1L5Z9 754 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 CRELD2Q6UXH1 353 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-210ENST00000428307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.24□□□□□ -0.61
HDAC9-210ENST00000428307 RPUSD2Q8IZ73 545 aaKnown RBP11.24□□□□□ -0.61
HDAC9-210ENST00000428307 METTL13Q8N6R0 699 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 RNF149Q8NC42 400 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 SLC35G2Q8TBE7 412 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 HELQQ8TDG4 1101 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 CTNNBL1Q8WYA6 563 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-210ENST00000428307 FAM167AQ96KS9 214 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 NT5C1BQ96P26 610 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 THAP2Q9H0W7 228 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 RNPEPQ9H4A4 650 aa11.24□□□□□ -0.61
HDAC9-210ENST00000428307 CHORDC1Q9UHD1 332 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-210ENST00000428307 ASB14A6NK59 587 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 ABCD1P33897 745 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 GTF2A2P52657 109 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 IGBP1P78318 339 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 CCNA1P78396 465 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 RPS6KA1Q15418 735 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 IFI16Q16666 785 aaKnown RBP11.23□□□□□ -0.61
HDAC9-210ENST00000428307 ZBTB33Q86T24 672 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 DAAM2Q86T65 1068 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 RHPN2Q8IUC4 686 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 FAM71AQ8IYT1 594 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 LRRC57Q8N9N7 239 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 SHCBP1Q8NEM2 672 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 SCFD2Q8WU76 684 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 RRAGCQ9HB90 399 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 GBA2Q9HCG7 927 aaPredicted RBP11.23□□□□□ -0.61
HDAC9-210ENST00000428307 KIAA1586Q9HCI6 787 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 RBAKQ9NYW8 714 aaPredicted RBP11.23□□□□□ -0.61
HDAC9-210ENST00000428307 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 DAAM1Q9Y4D1 1078 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 STYXL1Q9Y6J8 313 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 IVNS1ABPQ9Y6Y0 642 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 A0A0G2JMZ2 1700 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 LOC285556D6RIA3 1793 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 A0A0B4J269 797 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 KCNK3O14649 394 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 CLDN3O15551 220 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 LGR5O75473 907 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 CLSTN1O94985 981 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 CELF2O95319 508 aaKnown RBP11.23□□□□□ -0.61
HDAC9-210ENST00000428307 CALCAP01258 141 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 FTLP02792 175 aaPredicted RBP11.23□□□□□ -0.61
HDAC9-210ENST00000428307 MYH9P35579 1960 aaKnown RBP11.23□□□□□ -0.61
HDAC9-210ENST00000428307 MCCD1P59942 119 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms