RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 DSC1Q08554 894 aa15.88■□□□□ 0.13
HDAC6-206ENST00000426196 PPP2R5DQ14738 602 aa15.88■□□□□ 0.13
HDAC6-206ENST00000426196 FUT10Q6P4F1 479 aa15.88■□□□□ 0.13
HDAC6-206ENST00000426196 LILRA6Q6PI73 481 aa15.88■□□□□ 0.13
HDAC6-206ENST00000426196 SRGAP1Q7Z6B7 1085 aa15.88■□□□□ 0.13
HDAC6-206ENST00000426196 B3GALT6Q96L58 329 aa15.88■□□□□ 0.13
HDAC6-206ENST00000426196 MBOAT7Q96N66 472 aa15.88■□□□□ 0.13
HDAC6-206ENST00000426196 CEP89Q96ST8 783 aa15.88■□□□□ 0.13
HDAC6-206ENST00000426196 KXD1Q9BQD3 176 aa15.88■□□□□ 0.13
HDAC6-206ENST00000426196 SH2D3AQ9BRG2 576 aa15.88■□□□□ 0.13
HDAC6-206ENST00000426196 PHF20Q9BVI0 1012 aa15.88■□□□□ 0.13
HDAC6-206ENST00000426196 ZMYND12Q9H0C1 365 aa15.88■□□□□ 0.13
HDAC6-206ENST00000426196 COL4A3BPQ9Y5P4 624 aa15.88■□□□□ 0.13
HDAC6-206ENST00000426196 FASNP49327 2511 aaKnown RBP15.87■□□□□ 0.13
HDAC6-206ENST00000426196 ARL5CA6NH57 179 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 GOLGA8AA7E2F4 631 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 DDX11L8A8MPP1 907 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 GOLGA8BA8MQT2 603 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 F8W810 466 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 XYLBO75191 536 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 RPL17P18621 184 aaKnown RBP15.87■□□□□ 0.13
HDAC6-206ENST00000426196 KCNA4P22459 653 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 GNA11P29992 359 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 MLH1P40692 756 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 PFKFB3Q16875 520 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-206ENST00000426196 UBXN11Q5T124 520 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 ZNF852Q6ZMS4 543 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 CELF5Q8N6W0 485 aaKnown RBP15.87■□□□□ 0.13
HDAC6-206ENST00000426196 DDX1Q92499 740 aaKnown RBP15.87■□□□□ 0.13
HDAC6-206ENST00000426196 SLC5A5Q92911 643 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 GAD1Q99259 594 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 FBXW11Q9UKB1 542 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 ANGPTL2Q9UKU9 493 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 POLIQ9UNA4 740 aa15.87■□□□□ 0.13
HDAC6-206ENST00000426196 ANKRD11Q6UB99 2663 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-206ENST00000426196 NOTCH4Q99466 2003 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 RETP07949 1114 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 HOXA11P31270 313 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-206ENST00000426196 SCNN1GP51170 649 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 NTHL1P78549 312 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 ADCY1Q08828 1119 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 MTAPQ13126 283 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 LPAL2Q16609 132 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 PPM1LQ5SGD2 360 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 SMG8Q8ND04 991 aaKnown RBP15.86■□□□□ 0.13
HDAC6-206ENST00000426196 BICD2Q8TD16 824 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 SLC7A3Q8WY07 619 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 CCDC136Q96JN2 1154 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 GPR62Q9BZJ7 368 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 IPPQ9Y573 584 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 SDK1Q7Z5N4 2213 aa15.86■□□□□ 0.13
HDAC6-206ENST00000426196 ADAMTS3O15072 1205 aa15.85■□□□□ 0.13
HDAC6-206ENST00000426196 ERLIN2O94905 339 aa15.85■□□□□ 0.13
HDAC6-206ENST00000426196 STBD1O95210 358 aa15.85■□□□□ 0.13
HDAC6-206ENST00000426196 SRGAP2CP0DJJ0 459 aa15.85■□□□□ 0.13
HDAC6-206ENST00000426196 HOXA9P31269 272 aa15.85■□□□□ 0.13
HDAC6-206ENST00000426196 CREB3L3Q68CJ9 461 aa15.85■□□□□ 0.13
HDAC6-206ENST00000426196 PRR23BQ6ZRT6 265 aa15.85■□□□□ 0.13
HDAC6-206ENST00000426196 HACE1Q8IYU2 909 aa15.85■□□□□ 0.13
HDAC6-206ENST00000426196 PSPC1Q8WXF1 523 aaKnown RBP15.85■□□□□ 0.13
HDAC6-206ENST00000426196 ADAM28Q9UKQ2 775 aa15.85■□□□□ 0.13
HDAC6-206ENST00000426196 ZFYVE26Q68DK2 2539 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 CCL16O15467 120 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 ZZEF1O43149 2961 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 C8AP07357 584 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 PRR23CQ6ZRP0 262 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 EXOC8Q8IYI6 725 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 ITFG1Q8TB96 612 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 CCDC51Q96ER9 411 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 ZFP42Q96MM3 310 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 IER2Q9BTL4 223 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 APOL6Q9BWW8 343 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 MINDY3Q9H8M7 445 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 SEMA4GQ9NTN9 838 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 RALYQ9UKM9 306 aaKnown RBP15.84■□□□□ 0.13
HDAC6-206ENST00000426196 BRPF3Q9ULD4 1205 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 SF3B1O75533 1304 aaKnown RBP eCLIP15.84■□□□□ 0.131e-6■■■■■ 66.8
HDAC6-206ENST00000426196 SPAG17Q6Q759 2223 aa15.84■□□□□ 0.13
HDAC6-206ENST00000426196 FOXD2O60548 495 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-206ENST00000426196 TADA2AO75478 443 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 PSMD10O75832 226 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 CDC27P30260 824 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 AXLP30530 894 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 USP11P51784 963 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 NCBP1Q09161 790 aaKnown RBP15.83■□□□□ 0.12
HDAC6-206ENST00000426196 COL9A2Q14055 689 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-206ENST00000426196 PLA2G4FQ68DD2 849 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 NOTUMQ6P988 496 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 PRSS55Q6UWB4 352 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-206ENST00000426196 ANO5Q75V66 913 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 NPAS3Q8IXF0 933 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 PRPF31Q8WWY3 499 aaKnown RBP15.83■□□□□ 0.12
HDAC6-206ENST00000426196 GJA10Q969M2 543 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 EIF2AQ9BY44 585 aaKnown RBP15.83■□□□□ 0.12
HDAC6-206ENST00000426196 TRIM6Q9C030 488 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-206ENST00000426196 LSG1Q9H089 658 aaKnown RBP15.83■□□□□ 0.12
HDAC6-206ENST00000426196 RNF39Q9H2S5 420 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 CHRDQ9H2X0 955 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 HEBP1Q9NRV9 189 aa15.83■□□□□ 0.12
HDAC6-206ENST00000426196 MIOSQ9NXC5 875 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms