RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 BICDL2A1A5D9 508 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 BIN1O00499 593 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 EDN1P05305 212 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 PRCPP42785 496 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 NLRP12P59046 1061 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 KCNA1Q09470 495 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 UBXN11Q5T124 520 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 FOXR2Q6PJQ5 311 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 ADSSL1Q8N142 457 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 GLIS3Q8NEA6 775 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 TMEM174Q8WUU8 243 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 TOP1MTQ969P6 601 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 MSTO1Q9BUK6 570 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 CDT1Q9H211 546 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 KIAA1586Q9HCI6 787 aa26.32■■□□□ 1.8
APOE-202ENST00000425718 TRIP11Q15643 1979 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 A0A0B4J269 797 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 OGTO15294 1046 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 ITGA4P13612 1032 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 RPL13P26373 211 aaKnown RBP26.31■■□□□ 1.8
APOE-202ENST00000425718 GRM5P41594 1212 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 YARSP54577 528 aaKnown RBP26.31■■□□□ 1.8
APOE-202ENST00000425718 LRRC63Q05C16 580 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 NFIL3Q16649 462 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 TCTN1Q2MV58 587 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 PRPF38BQ5VTL8 546 aaKnown RBP26.31■■□□□ 1.8
APOE-202ENST00000425718 EEF1DP3Q658K8 133 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 TDHQ8IZJ6 230 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 KCTD10Q9H3F6 313 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 TOPORSQ9NS56 1045 aaPredicted RBP26.31■■□□□ 1.8
APOE-202ENST00000425718 ANO10Q9NW15 660 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 AGO2Q9UKV8 859 aaKnown RBP26.31■■□□□ 1.8
APOE-202ENST00000425718 TRAF3IP3Q9Y228 551 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 GIT1Q9Y2X7 761 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 IPPQ9Y573 584 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.31■■□□□ 1.8
APOE-202ENST00000425718 RALGAPA2Q2PPJ7 1873 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 PTPRSQ13332 1948 aa26.31■■□□□ 1.8
APOE-202ENST00000425718 TDRD15B5MCY1 1934 aaKnown RBP26.3■■□□□ 1.8
APOE-202ENST00000425718 TTLL13PA6NNM8 815 aa26.3■■□□□ 1.8
APOE-202ENST00000425718 ABLIM1O14639 778 aa26.3■■□□□ 1.8
APOE-202ENST00000425718 EDRF1Q3B7T1 1238 aa26.3■■□□□ 1.8
APOE-202ENST00000425718 EIF2AQ9BY44 585 aaKnown RBP26.3■■□□□ 1.8
APOE-202ENST00000425718 AGPAT3Q9NRZ7 376 aa26.3■■□□□ 1.8
APOE-202ENST00000425718 FNDC1Q4ZHG4 1894 aaPredicted RBP26.3■■□□□ 1.8
APOE-202ENST00000425718 ANKRD63C9JTQ0 380 aa26.29■■□□□ 1.8
APOE-202ENST00000425718 ATP2A2P16615 1042 aaKnown RBP26.29■■□□□ 1.8
APOE-202ENST00000425718 CCNE1P24864 410 aa26.29■■□□□ 1.8
APOE-202ENST00000425718 HOXD13P35453 343 aa26.29■■□□□ 1.8
APOE-202ENST00000425718 SHHQ15465 462 aa26.29■■□□□ 1.8
APOE-202ENST00000425718 STX1AQ16623 288 aa26.29■■□□□ 1.8
APOE-202ENST00000425718 ISM2Q6H9L7 571 aa26.29■■□□□ 1.8
APOE-202ENST00000425718 CENPPQ6IPU0 288 aa26.29■■□□□ 1.8
APOE-202ENST00000425718 SLC39A4Q6P5W5 647 aa26.29■■□□□ 1.8
APOE-202ENST00000425718 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.29■■□□□ 1.85e-27■■■■■ 29.1
APOE-202ENST00000425718 ZBTB33Q86T24 672 aa26.29■■□□□ 1.8
APOE-202ENST00000425718 ZNF598Q86UK7 904 aaKnown RBP26.29■■□□□ 1.8
APOE-202ENST00000425718 CDR2LQ86X02 465 aaPredicted RBP26.29■■□□□ 1.8
APOE-202ENST00000425718 SLC9A9Q8IVB4 645 aa26.29■■□□□ 1.8
APOE-202ENST00000425718 SMYD4Q8IYR2 804 aaPredicted RBP26.29■■□□□ 1.8
APOE-202ENST00000425718 ABI1Q8IZP0 508 aa26.29■■□□□ 1.8
APOE-202ENST00000425718 ACAP3Q96P50 834 aa26.29■■□□□ 1.8
APOE-202ENST00000425718 TGFB1I1O43294 461 aa26.28■■□□□ 1.8
APOE-202ENST00000425718 CLTAP09496 248 aa26.28■■□□□ 1.8
APOE-202ENST00000425718 PAK1Q13153 545 aa26.28■■□□□ 1.8
APOE-202ENST00000425718 P2RX5Q93086 422 aa26.28■■□□□ 1.8
APOE-202ENST00000425718 ZBTB45Q96K62 511 aaPredicted RBP26.28■■□□□ 1.8
APOE-202ENST00000425718 TSPAN18Q96SJ8 248 aa26.28■■□□□ 1.8
APOE-202ENST00000425718 MAPK8IP1Q9UQF2 711 aa26.28■■□□□ 1.8
APOE-202ENST00000425718 USP20Q9Y2K6 914 aa26.28■■□□□ 1.8
APOE-202ENST00000425718 CARNS1A5YM72 827 aa26.27■■□□□ 1.8
APOE-202ENST00000425718 CCDC192P0DO97 292 aa26.27■■□□□ 1.8
APOE-202ENST00000425718 HARSP12081 509 aaKnown RBP26.27■■□□□ 1.8
APOE-202ENST00000425718 C9orf50Q5SZB4 431 aa26.27■■□□□ 1.8
APOE-202ENST00000425718 GLB1LQ6UWU2 654 aa26.27■■□□□ 1.8
APOE-202ENST00000425718 CD302Q8IX05 232 aa26.27■■□□□ 1.8
APOE-202ENST00000425718 GPD1LQ8N335 351 aa26.27■■□□□ 1.8
APOE-202ENST00000425718 SMG8Q8ND04 991 aaKnown RBP26.27■■□□□ 1.8
APOE-202ENST00000425718 ZBED2Q9BTP6 218 aa26.27■■□□□ 1.8
APOE-202ENST00000425718 MRPL9Q9BYD2 267 aaKnown RBP26.27■■□□□ 1.8
APOE-202ENST00000425718 RSAD1Q9HA92 442 aa26.27■■□□□ 1.8
APOE-202ENST00000425718 PLEKHA5Q9HAU0 1116 aa26.27■■□□□ 1.8
APOE-202ENST00000425718 KANSL3Q9P2N6 904 aa26.27■■□□□ 1.8
APOE-202ENST00000425718 PDCD11Q14690 1871 aaKnown RBP26.26■■□□□ 1.79
APOE-202ENST00000425718 PPP1R3GB7ZBB8 358 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 EXTL3O43909 919 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 GJB5O95377 273 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 FGFR1OPO95684 399 aaKnown RBP26.26■■□□□ 1.79
APOE-202ENST00000425718 BMP6P22004 513 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 DEFB103AP81534 67 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 CHRDL2Q6WN34 429 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 THNSL1Q8IYQ7 743 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 XXYLT1Q8NBI6 393 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 RNF169Q8NCN4 708 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 URGCPQ8TCY9 931 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 TMEM117Q9H0C3 514 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 NXF3Q9H4D5 531 aaKnown RBP26.26■■□□□ 1.79
APOE-202ENST00000425718 RPF1Q9H9Y2 349 aaKnown RBP26.26■■□□□ 1.79
APOE-202ENST00000425718 HSPBP1Q9NZL4 362 aa26.26■■□□□ 1.79
APOE-202ENST00000425718 CXXC1Q9P0U4 656 aaPredicted RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms