RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 BMS1Q14692 1282 aaKnown RBP14.4□□□□□ -0.1
VRK3-203ENST00000424804 PCBP1Q15365 356 aaKnown RBP eCLIP14.4□□□□□ -0.1
VRK3-203ENST00000424804 ZNF174Q15697 407 aa14.4□□□□□ -0.1
VRK3-203ENST00000424804 CABP7Q86V35 215 aa14.4□□□□□ -0.1
VRK3-203ENST00000424804 PPFIBP1Q86W92 1011 aa14.4□□□□□ -0.1
VRK3-203ENST00000424804 CDR2LQ86X02 465 aaPredicted RBP14.4□□□□□ -0.1
VRK3-203ENST00000424804 UBALD2Q8IYN6 164 aa14.4□□□□□ -0.1
VRK3-203ENST00000424804 TMEM105Q8N8V8 129 aa14.4□□□□□ -0.1
VRK3-203ENST00000424804 CCDC51Q96ER9 411 aa14.4□□□□□ -0.1
VRK3-203ENST00000424804 RPS6KC1Q96S38 1066 aa14.4□□□□□ -0.1
VRK3-203ENST00000424804 CXCL16Q9H2A7 254 aa14.4□□□□□ -0.1
VRK3-203ENST00000424804 FOXP1Q9H334 677 aaPredicted RBP14.4□□□□□ -0.1
VRK3-203ENST00000424804 NXF3Q9H4D5 531 aaKnown RBP14.4□□□□□ -0.1
VRK3-203ENST00000424804 UBN1Q9NPG3 1134 aa14.4□□□□□ -0.1
VRK3-203ENST00000424804 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
VRK3-203ENST00000424804 NOL7Q9UMY1 257 aaKnown RBP14.4□□□□□ -0.1
VRK3-203ENST00000424804 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.4□□□□□ -0.1
VRK3-203ENST00000424804 A0A1B0GUA9 196 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 POTEMA6NI47 508 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 INO80B-WBP1J3KQ70 363 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 TEX28O15482 410 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 MED24O75448 989 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 KLRC2P26717 231 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 MLH1P40692 756 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 TTC38Q5R3I4 469 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 NOTUMQ6P988 496 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 CATSPER3Q86XQ3 398 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 NOSTRINQ8IVI9 506 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 CMASQ8NFW8 434 aaPredicted RBP14.39□□□□□ -0.11
VRK3-203ENST00000424804 PRRX2Q99811 253 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 GPR62Q9BZJ7 368 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 SFXN1Q9H9B4 322 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 GPRC5CQ9NQ84 441 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 MRPL17Q9NRX2 175 aaKnown RBP14.39□□□□□ -0.11
VRK3-203ENST00000424804 STK39Q9UEW8 545 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 GIT1Q9Y2X7 761 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 PRG3Q9Y2Y8 225 aaPredicted RBP14.39□□□□□ -0.11
VRK3-203ENST00000424804 CFAP54Q96N23 3096 aa14.39□□□□□ -0.11
VRK3-203ENST00000424804 VPS13AQ96RL7 3174 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 ERLIN2O94905 339 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 EDN1P05305 212 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 NPR3P17342 541 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 AKAP5P24588 427 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 OR1G1P47890 313 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 DSG1Q02413 1049 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 MTMR3Q13615 1198 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 NBR1Q14596 966 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 LILRA6Q6PI73 481 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 C15orf39Q6ZRI6 1047 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 PLCD3Q8N3E9 789 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 TDRD5Q8NAT2 981 aaKnown RBP14.38□□□□□ -0.11
VRK3-203ENST00000424804 BSNDQ8WZ55 320 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 ZNF707Q96C28 371 aaPredicted RBP14.38□□□□□ -0.11
VRK3-203ENST00000424804 B3GALT6Q96L58 329 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 FAM193BQ96PV7 902 aaPredicted RBP14.38□□□□□ -0.11
VRK3-203ENST00000424804 EMILIN2Q9BXX0 1053 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 RHOBTB2Q9BYZ6 727 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 POLR3FQ9H1D9 316 aaPredicted RBP14.38□□□□□ -0.11
VRK3-203ENST00000424804 FZD8Q9H461 694 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 FAM86C1Q9NVL1 165 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 CACNG4Q9UBN1 327 aa14.38□□□□□ -0.11
VRK3-203ENST00000424804 DBR1Q9UK59 544 aaKnown RBP14.38□□□□□ -0.11
VRK3-203ENST00000424804 TRIP11Q15643 1979 aa14.37□□□□□ -0.11
VRK3-203ENST00000424804 C2CD2LO14523 706 aa14.37□□□□□ -0.11
VRK3-203ENST00000424804 TFDP1Q14186 410 aa14.37□□□□□ -0.11
VRK3-203ENST00000424804 NAB2Q15742 525 aa14.37□□□□□ -0.11
VRK3-203ENST00000424804 LARP1BQ659C4 914 aaKnown RBP14.37□□□□□ -0.11
VRK3-203ENST00000424804 CDCA2Q69YH5 1023 aaPredicted RBP14.37□□□□□ -0.11
VRK3-203ENST00000424804 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
VRK3-203ENST00000424804 ZBTB33Q86T24 672 aa14.37□□□□□ -0.11
VRK3-203ENST00000424804 C4orf32Q8N8J7 132 aa14.37□□□□□ -0.11
VRK3-203ENST00000424804 RABGGTAQ92696 567 aa14.37□□□□□ -0.11
VRK3-203ENST00000424804 PAAF1Q9BRP4 392 aa14.37□□□□□ -0.11
VRK3-203ENST00000424804 USP20Q9Y2K6 914 aa14.37□□□□□ -0.11
VRK3-203ENST00000424804 VWA8A3KMH1 1905 aa14.37□□□□□ -0.11
VRK3-203ENST00000424804 RIF1Q5UIP0 2472 aaKnown RBP14.36□□□□□ -0.11
VRK3-203ENST00000424804 GALR2O43603 387 aaPredicted RBP14.36□□□□□ -0.11
VRK3-203ENST00000424804 USO1O60763 962 aaKnown RBP14.36□□□□□ -0.11
VRK3-203ENST00000424804 RFPL2O75678 378 aa14.36□□□□□ -0.11
VRK3-203ENST00000424804 NPTXRO95502 500 aa14.36□□□□□ -0.11
VRK3-203ENST00000424804 IGFBP6P24592 240 aaPredicted RBP14.36□□□□□ -0.11
VRK3-203ENST00000424804 GLUD2P49448 558 aa14.36□□□□□ -0.11
VRK3-203ENST00000424804 NUBP1P53384 320 aa14.36□□□□□ -0.11
VRK3-203ENST00000424804 ECM1Q16610 540 aa14.36□□□□□ -0.11
VRK3-203ENST00000424804 FAM187BQ17R55 369 aa14.36□□□□□ -0.11
VRK3-203ENST00000424804 CWF19L1Q69YN2 538 aaKnown RBP14.36□□□□□ -0.11
VRK3-203ENST00000424804 SLC27A1Q6PCB7 646 aa14.36□□□□□ -0.11
VRK3-203ENST00000424804 GPR65Q8IYL9 337 aa14.36□□□□□ -0.11
VRK3-203ENST00000424804 CCDC43Q96MW1 224 aaKnown RBP14.36□□□□□ -0.11
VRK3-203ENST00000424804 POLR3CQ9BUI4 534 aaPredicted RBP14.36□□□□□ -0.11
VRK3-203ENST00000424804 APOL6Q9BWW8 343 aa14.36□□□□□ -0.11
VRK3-203ENST00000424804 KCNK12Q9HB15 430 aa14.36□□□□□ -0.11
VRK3-203ENST00000424804 TUFT1Q9NNX1 390 aa14.36□□□□□ -0.11
VRK3-203ENST00000424804 MAN1C1Q9NR34 630 aa14.36□□□□□ -0.11
VRK3-203ENST00000424804 KLK14Q9P0G3 267 aa14.36□□□□□ -0.11
VRK3-203ENST00000424804 ZMYM2Q9UBW7 1377 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 PTPRZ1P23471 2315 aaPredicted RBP14.35□□□□□ -0.11
VRK3-203ENST00000424804 CCDC195A0A1B0GUA6 201 aa14.35□□□□□ -0.11
VRK3-203ENST00000424804 VPS37CA5D8V6 355 aaPredicted RBP14.35□□□□□ -0.11
VRK3-203ENST00000424804 H0Y858 1186 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms