RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 AGBL2Q5U5Z8 902 aa7.29□□□□□ -1.24
CNOT4-205ENST00000423368 SNRNP48Q6IEG0 339 aaKnown RBP7.29□□□□□ -1.24
CNOT4-205ENST00000423368 AGGF1Q8N302 714 aaeCLIP7.29□□□□□ -1.24
CNOT4-205ENST00000423368 MB21D1Q8N884 522 aa7.29□□□□□ -1.24
CNOT4-205ENST00000423368 SLC7A3Q8WY07 619 aa7.29□□□□□ -1.24
CNOT4-205ENST00000423368 SLC7A6OSQ96CW6 309 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-205ENST00000423368 CNBD2Q96M20 576 aa7.29□□□□□ -1.24
CNOT4-205ENST00000423368 TBATAQ96M53 351 aa7.29□□□□□ -1.24
CNOT4-205ENST00000423368 CRAMP1Q96RY5 1269 aa7.29□□□□□ -1.24
CNOT4-205ENST00000423368 PACSIN1Q9BY11 444 aa7.29□□□□□ -1.24
CNOT4-205ENST00000423368 CADM1Q9BY67 442 aaKnown RBP7.29□□□□□ -1.24
CNOT4-205ENST00000423368 ISCUQ9H1K1 167 aa7.29□□□□□ -1.24
CNOT4-205ENST00000423368 NPHS2Q9NP85 383 aa7.29□□□□□ -1.24
CNOT4-205ENST00000423368 SAP30BPQ9UHR5 308 aaKnown RBP7.29□□□□□ -1.24
CNOT4-205ENST00000423368 PTPN22Q9Y2R2 807 aa7.29□□□□□ -1.24
CNOT4-205ENST00000423368 MYH1P12882 1939 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 A0A1B0GTW7 788 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 KANSL1LA0AUZ9 987 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 MATN2O00339 956 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 RASGRF2O14827 1237 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 EPHB6O15197 1021 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 ZBED4O75132 1171 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 ZBTB7AO95365 584 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 ZNF16P17020 682 aaPredicted RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 IFNA8P32881 189 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 PMS1P54277 932 aaKnown RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 CDC16Q13042 620 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 ZBTB17Q13105 803 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 CWF19L2Q2TBE0 894 aaKnown RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 ARL13BQ3SXY8 428 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 TIGD2Q4W5G0 525 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 PERM1Q5SV97 790 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 LRIG3Q6UXM1 1119 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 TMC5Q6UXY8 1006 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 RGS9BPQ6ZS82 235 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 CYB5R4Q7L1T6 521 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 RALYLQ86SE5 291 aaKnown RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 SNX29P2Q8IUI4 249 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 NOSTRINQ8IVI9 506 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 SHKBP1Q8TBC3 707 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 ZNF507Q8TCN5 953 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 NCSTNQ92542 709 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 ECSITQ9BQ95 431 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 KIAA1586Q9HCI6 787 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 VTA1Q9NP79 307 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 RRN3Q9NYV6 651 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 C9orf78Q9NZ63 289 aaPredicted RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 GPRC5DQ9NZD1 345 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 TXNDC16Q9P2K2 825 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 MAGEC2Q9UBF1 373 aaPredicted RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 A0A1W2PRG0 241 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 FAM205CA6NFA0 338 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 FAM47E-STBD1D6RA91 191 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 H7C0C1 242 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 TNFRSF10AO00220 468 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 PITPNM1O00562 1244 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 SOCS7O14512 581 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 GPR37L1O60883 481 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 PABPC4LP0CB38 370 aaKnown RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 KRT10P13645 584 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 BRAFP15056 766 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 PRKACAP17612 351 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 MMP13P45452 471 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 ATXN3P54252 364 aaPredicted RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 OCRLQ01968 901 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 PAK1Q13153 545 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 MPP2Q14168 576 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 FAM214AQ32MH5 1076 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 RABL6Q3YEC7 729 aaPredicted RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 DEPDC1Q5TB30 811 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 EGFLAMQ63HQ2 1017 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 PPP1R21Q6ZMI0 780 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 NPLOC4Q8TAT6 608 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 ESR2Q92731 530 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 PRR11Q96HE9 360 aaPredicted RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 LLPHQ9BRT6 129 aaKnown RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 HERC2P3Q9BVR0 1158 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 IRF2BPLQ9H1B7 796 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 CCDC177Q9NQR7 707 aaPredicted RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 NDE1Q9NXR1 346 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 ARHGAP20Q9P2F6 1191 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 ZFP69BQ9UJL9 534 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 NR2E1Q9Y466 385 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 PTPRTO14522 1441 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 PPP1R3GB7ZBB8 358 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 E7EWF7 191 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 DDX3XO00571 662 aaKnown RBP eCLIP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 CYP26A1O43174 497 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 T-ENOLP0DO92 83 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 BTDP43251 543 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 IST1P53990 364 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 VCPP55072 806 aaKnown RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 AQP4P55087 323 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 EIF3BP55884 814 aaKnown RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 AMPD3Q01432 767 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 IGSF11Q5DX21 431 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 CDKAL1Q5VV42 579 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 CYP4V2Q6ZWL3 525 aaPredicted RBP7.28□□□□□ -1.24
CNOT4-205ENST00000423368 NME9Q86XW9 330 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 MREGQ8N565 214 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms