RNA–Protein interactions for RNA: ENST00000422877.1

SEC23B-205, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 3

Gene SEC23B, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-205ENST00000422877 PIGRP01833 764 aa15.2■□□□□ 0.02
SEC23B-205ENST00000422877 LIG1P18858 919 aa15.2■□□□□ 0.02
SEC23B-205ENST00000422877 GTF2BQ00403 316 aa15.2■□□□□ 0.02
SEC23B-205ENST00000422877 UBE3AQ05086 875 aa15.2■□□□□ 0.02
SEC23B-205ENST00000422877 PTPROQ16827 1216 aa15.2■□□□□ 0.02
SEC23B-205ENST00000422877 SPOUT1Q5T280 376 aaKnown RBP15.2■□□□□ 0.02
SEC23B-205ENST00000422877 CDR2LQ86X02 465 aaPredicted RBP15.2■□□□□ 0.02
SEC23B-205ENST00000422877 COLGALT1Q8NBJ5 622 aa15.2■□□□□ 0.02
SEC23B-205ENST00000422877 MRPL38Q96DV4 380 aaKnown RBP15.2■□□□□ 0.02
SEC23B-205ENST00000422877 TRIM9Q9C026 710 aa15.2■□□□□ 0.02
SEC23B-205ENST00000422877 TBC1D13Q9NVG8 400 aa15.2■□□□□ 0.02
SEC23B-205ENST00000422877 HES2Q9Y543 173 aa15.2■□□□□ 0.02
SEC23B-205ENST00000422877 ABLIM1O14639 778 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 MCF2P10911 925 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 PFKFB1P16118 471 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 IGFBP4P22692 258 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 PLCB3Q01970 1234 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 ALCAMQ13740 583 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 ZNF568Q3ZCX4 644 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 EEF1DP3Q658K8 133 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 KCNT2Q6UVM3 1135 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 MPZL3Q6UWV2 235 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 SFR1Q86XK3 245 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 MAP4K3Q8IVH8 894 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 CCDC65Q8IXS2 484 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 MAFAQ8NHW3 353 aaPredicted RBP15.19■□□□□ 0.02
SEC23B-205ENST00000422877 CHAMP1Q96JM3 812 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 ZNF558Q96NG5 402 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 C7orf25Q9BPX7 421 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 TARS2Q9BW92 718 aaKnown RBP15.19■□□□□ 0.02
SEC23B-205ENST00000422877 CDT1Q9H211 546 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 ZHX3Q9H4I2 956 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 TBX20Q9UMR3 447 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 PLAGL2Q9UPG8 496 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 LZTS1Q9Y250 596 aa15.19■□□□□ 0.02
SEC23B-205ENST00000422877 MTCL1Q9Y4B5 1905 aaKnown RBP15.19■□□□□ 0.02
SEC23B-205ENST00000422877 VWA8A3KMH1 1905 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 ARL5CA6NH57 179 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 PPP1R37O75864 691 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 ITGB1P05556 798 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 MYL1P05976 194 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 SLFN14P0C7P3 912 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 MLH1P40692 756 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 RNASELQ05823 741 aaKnown RBP15.18■□□□□ 0.02
SEC23B-205ENST00000422877 LONRF3Q496Y0 759 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 TIGD5Q53EQ6 642 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 ZNF720Q7Z2F6 126 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 CEP57L1Q8IYX8 460 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 KLHL23Q8NBE8 558 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 GAD1Q99259 594 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 TMEM175Q9BSA9 504 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 STRA6Q9BX79 667 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 RNF39Q9H2S5 420 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 NRDE2Q9H7Z3 1164 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 PANK4Q9NVE7 773 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 HCSTQ9UBK5 93 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 INPP5FQ9Y2H2 1132 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 UNC80Q8N2C7 3258 aa15.18■□□□□ 0.02
SEC23B-205ENST00000422877 A0A1B0GVL5 298 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 ACTN4O43707 911 aaKnown RBP15.17■□□□□ 0.02
SEC23B-205ENST00000422877 FGF18O76093 207 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 RECQL4O94761 1208 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 IDEP14735 1019 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 NMT1P30419 496 aaKnown RBP15.17■□□□□ 0.02
SEC23B-205ENST00000422877 GRM5P41594 1212 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 ALDH7A1P49419 539 aaKnown RBP15.17■□□□□ 0.02
SEC23B-205ENST00000422877 BCAR1P56945 870 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 MCL1Q07820 350 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 GRIK3Q13003 919 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 NOLC1Q14978 699 aaKnown RBP eCLIP15.17■□□□□ 0.02
SEC23B-205ENST00000422877 THNSL1Q8IYQ7 743 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 SLC39A11Q8N1S5 342 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 GSTCDQ8NEC7 633 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 SPPL3Q8TCT6 385 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 MRPS27Q92552 414 aaKnown RBP15.17■□□□□ 0.02
SEC23B-205ENST00000422877 ZFP42Q96MM3 310 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 RPS6KC1Q96S38 1066 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 CCDC94Q9BW85 323 aaPredicted RBP15.17■□□□□ 0.02
SEC23B-205ENST00000422877 APOL6Q9BWW8 343 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 MRPL44Q9H9J2 332 aaKnown RBP15.17■□□□□ 0.02
SEC23B-205ENST00000422877 SPG21Q9NZD8 308 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 CHMP5Q9NZZ3 219 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 STK39Q9UEW8 545 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 USP20Q9Y2K6 914 aa15.17■□□□□ 0.02
SEC23B-205ENST00000422877 DLL1O00548 723 aa15.16■□□□□ 0.02
SEC23B-205ENST00000422877 HNRNPDLO14979 420 aaKnown RBP15.16■□□□□ 0.02
SEC23B-205ENST00000422877 GRM6O15303 877 aa15.16■□□□□ 0.02
SEC23B-205ENST00000422877 CLDN3O15551 220 aa15.16■□□□□ 0.02
SEC23B-205ENST00000422877 ZC3H11AO75152 810 aaKnown RBP eCLIP15.16■□□□□ 0.02
SEC23B-205ENST00000422877 POMCP01189 267 aa15.16■□□□□ 0.02
SEC23B-205ENST00000422877 AKAP5P24588 427 aa15.16■□□□□ 0.02
SEC23B-205ENST00000422877 SYKP43405 635 aa15.16■□□□□ 0.02
SEC23B-205ENST00000422877 LIG4P49917 911 aa15.16■□□□□ 0.02
SEC23B-205ENST00000422877 SCNN1GP51170 649 aa15.16■□□□□ 0.02
SEC23B-205ENST00000422877 DSC1Q08554 894 aa15.16■□□□□ 0.02
SEC23B-205ENST00000422877 COASYQ13057 564 aa15.16■□□□□ 0.02
SEC23B-205ENST00000422877 KYAT1Q16773 422 aa15.16■□□□□ 0.02
SEC23B-205ENST00000422877 HERC4Q5GLZ8 1057 aaPredicted RBP15.16■□□□□ 0.02
SEC23B-205ENST00000422877 PDE12Q6L8Q7 609 aaKnown RBP15.16■□□□□ 0.02
SEC23B-205ENST00000422877 UNC13DQ70J99 1090 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms