RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 POMGNT1Q8WZA1 660 aa12.89□□□□□ -0.35
CAST-208ENST00000421689 HERVK_113Q902F9 699 aa12.89□□□□□ -0.35
CAST-208ENST00000421689 P2RX5Q93086 422 aa12.89□□□□□ -0.35
CAST-208ENST00000421689 TSG101Q99816 390 aa12.89□□□□□ -0.35
CAST-208ENST00000421689 GDF15Q99988 308 aa12.89□□□□□ -0.35
CAST-208ENST00000421689 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.89□□□□□ -0.35
CAST-208ENST00000421689 MSTO1Q9BUK6 570 aa12.89□□□□□ -0.35
CAST-208ENST00000421689 EIF2AQ9BY44 585 aaKnown RBP12.89□□□□□ -0.35
CAST-208ENST00000421689 CDT1Q9H211 546 aa12.89□□□□□ -0.35
CAST-208ENST00000421689 MTIF3Q9H2K0 278 aaKnown RBP12.89□□□□□ -0.35
CAST-208ENST00000421689 IKZF4Q9H2S9 585 aa12.89□□□□□ -0.35
CAST-208ENST00000421689 SEMA6BQ9H3T3 888 aa12.89□□□□□ -0.35
CAST-208ENST00000421689 AGPAT3Q9NRZ7 376 aa12.89□□□□□ -0.35
CAST-208ENST00000421689 TRAF3IP3Q9Y228 551 aa12.89□□□□□ -0.35
CAST-208ENST00000421689 PCDHB2Q9Y5E7 798 aa12.89□□□□□ -0.35
CAST-208ENST00000421689 A0A0B4J269 797 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 BICDL2A1A5D9 508 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 TISP43B9A030 160 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 CLIC2O15247 247 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 EOMESO95936 686 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 LDHAP00338 332 aaKnown RBP12.88□□□□□ -0.35
CAST-208ENST00000421689 AMHP03971 560 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 ADSSP30520 456 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 KCNJ6P48051 423 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 LRRC63Q05C16 580 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 TYRO3Q06418 890 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 PAK1Q13153 545 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 MYBPC2Q14324 1141 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 NFIL3Q16649 462 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 KYAT1Q16773 422 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 KLHL10Q6JEL2 608 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 MRPL10Q7Z7H8 261 aaKnown RBP12.88□□□□□ -0.35
CAST-208ENST00000421689 ECHDC2Q86YB7 292 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 HACE1Q8IYU2 909 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 TMEM174Q8WUU8 243 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 NELFBQ8WX92 580 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 PGBD4Q96DM1 585 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 HAPLN2Q9GZV7 340 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 ELAC1Q9H777 363 aaKnown RBP12.88□□□□□ -0.35
CAST-208ENST00000421689 AGO2Q9UKV8 859 aaKnown RBP12.88□□□□□ -0.35
CAST-208ENST00000421689 CTNND2Q9UQB3 1225 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 IPPQ9Y573 584 aa12.88□□□□□ -0.35
CAST-208ENST00000421689 ZBBXA8MT70 800 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 OGTO15294 1046 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 HARSP12081 509 aaKnown RBP12.87□□□□□ -0.35
CAST-208ENST00000421689 RPL13P26373 211 aaKnown RBP12.87□□□□□ -0.35
CAST-208ENST00000421689 GRM5P41594 1212 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 WDR5P61964 334 aaKnown RBP12.87□□□□□ -0.35
CAST-208ENST00000421689 HSP90AA2PQ14568 343 aaPredicted RBP12.87□□□□□ -0.35
CAST-208ENST00000421689 EDRF1Q3B7T1 1238 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 ZCWPW2Q504Y3 356 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 ANKRD40Q6AI12 368 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 FOXR2Q6PJQ5 311 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.87□□□□□ -0.35
CAST-208ENST00000421689 SLC9A9Q8IVB4 645 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 THNSL1Q8IYQ7 743 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 SMG8Q8ND04 991 aaKnown RBP12.87□□□□□ -0.35
CAST-208ENST00000421689 CBWD1Q9BRT8 395 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 UBE2OQ9C0C9 1292 aaKnown RBP12.87□□□□□ -0.35
CAST-208ENST00000421689 PCIF1Q9H4Z3 704 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 TMEM161AQ9NX61 479 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 HSPBP1Q9NZL4 362 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 RWDD2AQ9UIY3 292 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 LRFN2Q9ULH4 789 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 PCDHB7Q9Y5E2 793 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 TTC3P53804 2025 aa12.87□□□□□ -0.35
CAST-208ENST00000421689 TRIM49BA6NDI0 452 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 NR3C1P04150 777 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 STAG3L1P0CL83 205 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 ITGA4P13612 1032 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 ERCC5P28715 1186 aaPredicted RBP12.86□□□□□ -0.35
CAST-208ENST00000421689 BMP8BP34820 402 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 ADAM9Q13443 819 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 ZNF598Q86UK7 904 aaKnown RBP12.86□□□□□ -0.35
CAST-208ENST00000421689 GPD1LQ8N335 351 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 XXYLT1Q8NBI6 393 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 TOP1MTQ969P6 601 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 ACAP3Q96P50 834 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 FUCA2Q9BTY2 467 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 CCDC94Q9BW85 323 aaPredicted RBP12.86□□□□□ -0.35
CAST-208ENST00000421689 NAT10Q9H0A0 1025 aaKnown RBP12.86□□□□□ -0.35
CAST-208ENST00000421689 GZF1Q9H116 711 aaPredicted RBP12.86□□□□□ -0.35
CAST-208ENST00000421689 NXF3Q9H4D5 531 aaKnown RBP12.86□□□□□ -0.35
CAST-208ENST00000421689 KIAA1586Q9HCI6 787 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 UBN1Q9NPG3 1134 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 DMAC2Q9NW81 257 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 SNTG2Q9NY99 539 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 SLC4A7Q9Y6M7 1214 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 PTPRSQ13332 1948 aa12.86□□□□□ -0.35
CAST-208ENST00000421689 CITO14578 2027 aa12.85□□□□□ -0.35
CAST-208ENST00000421689 CETN3O15182 167 aa12.85□□□□□ -0.35
CAST-208ENST00000421689 HOXA2O43364 376 aa12.85□□□□□ -0.35
CAST-208ENST00000421689 EXTL3O43909 919 aa12.85□□□□□ -0.35
CAST-208ENST00000421689 FAM189A1O60320 539 aa12.85□□□□□ -0.35
CAST-208ENST00000421689 EXOC3O60645 756 aa12.85□□□□□ -0.35
CAST-208ENST00000421689 UPP2O95045 317 aa12.85□□□□□ -0.35
CAST-208ENST00000421689 CLTAP09496 248 aa12.85□□□□□ -0.35
CAST-208ENST00000421689 ATF7P17544 494 aaPredicted RBP12.85□□□□□ -0.35
CAST-208ENST00000421689 IBSPP21815 317 aaPredicted RBP12.85□□□□□ -0.35
CAST-208ENST00000421689 NR2F2P24468 414 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms