RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 MRPL42Q9Y6G3 142 aaKnown RBP22.63■■□□□ 1.21
HMGXB4-203ENST00000420166 HNRNPDLO14979 420 aaKnown RBP22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 KLRC4O43908 158 aa22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 LINC00271P0C7V0 271 aa22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 PRR29P0C7W0 189 aa22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 MYBP10242 640 aa22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 LIG4P49917 911 aa22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 ERVK-21P61565 698 aa22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 UBE2HP62256 183 aa22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 KANK3Q6NY19 840 aa22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 DEFB123Q8N688 67 aa22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 CLP1Q92989 425 aaKnown RBP22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 HPS3Q969F9 1004 aa22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 APOL6Q9BWW8 343 aa22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 UBN1Q9NPG3 1134 aa22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 PCDHB13Q9Y5F0 798 aa22.62■■□□□ 1.21
HMGXB4-203ENST00000420166 TRIP11Q15643 1979 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 TDRD15B5MCY1 1934 aaKnown RBP22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 CITO14578 2027 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 NR1I2O75469 434 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 OFD1O75665 1012 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 MCF2P10911 925 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 NOMO2Q5JPE7 1267 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 L1TD1Q5T7N2 865 aaKnown RBP22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 ZBTB33Q86T24 672 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 LRRC43Q8N309 656 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 ZBTB45Q96K62 511 aaPredicted RBP22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 FAM161BQ96MY7 647 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 C17orf80Q9BSJ5 609 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 TCHPQ9BT92 498 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 MRPL9Q9BYD2 267 aaKnown RBP22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 ANKFY1Q9P2R3 1169 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 INPP5FQ9Y2H2 1132 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 GIT1Q9Y2X7 761 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 ZMYM2Q9UBW7 1377 aa22.61■■□□□ 1.21
HMGXB4-203ENST00000420166 PRPF40AO75400 957 aaKnown RBP22.6■■□□□ 1.21
HMGXB4-203ENST00000420166 AKAP5P24588 427 aa22.6■■□□□ 1.21
HMGXB4-203ENST00000420166 DPYDQ12882 1025 aa22.6■■□□□ 1.21
HMGXB4-203ENST00000420166 NOLC1Q14978 699 aaKnown RBP eCLIP22.6■■□□□ 1.21
HMGXB4-203ENST00000420166 STXBP4Q6ZWJ1 553 aa22.6■■□□□ 1.21
HMGXB4-203ENST00000420166 GLIS3Q8NEA6 775 aa22.6■■□□□ 1.21
HMGXB4-203ENST00000420166 TIGD1Q96MW7 591 aa22.6■■□□□ 1.21
HMGXB4-203ENST00000420166 SAMD11Q96NU1 681 aa22.6■■□□□ 1.21
HMGXB4-203ENST00000420166 GBP4Q96PP9 640 aa22.6■■□□□ 1.21
HMGXB4-203ENST00000420166 ACCSQ96QU6 501 aa22.6■■□□□ 1.21
HMGXB4-203ENST00000420166 CERS4Q9HA82 394 aa22.6■■□□□ 1.21
HMGXB4-203ENST00000420166 EXOC1Q9NV70 894 aa22.6■■□□□ 1.21
HMGXB4-203ENST00000420166 HCSTQ9UBK5 93 aa22.6■■□□□ 1.21
HMGXB4-203ENST00000420166 INPPL1O15357 1258 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 RPN1P04843 607 aaKnown RBP22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 MLH1P40692 756 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 MCL1Q07820 350 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 KCNA1Q09470 495 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 POSTNQ15063 836 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 KMT5BQ4FZB7 885 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 SLC39A4Q6P5W5 647 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 LRRC55Q6ZSA7 311 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 TMEM192Q8IY95 271 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 CEP120Q8N960 986 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 URGCPQ8TCY9 931 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 ARNTL2Q8WYA1 636 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 GAD1Q99259 594 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 CWH43Q9H720 699 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 TYW1Q9NV66 732 aaKnown RBP22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 SNTG2Q9NY99 539 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 PARP2Q9UGN5 583 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 MTUS1Q9ULD2 1270 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 EXOC7Q9UPT5 735 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 RWDD3Q9Y3V2 267 aa22.59■■□□□ 1.21
HMGXB4-203ENST00000420166 COL4A4P53420 1690 aaPredicted RBP22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 ARL5CA6NH57 179 aa22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 EIF3DO15371 548 aaKnown RBP eCLIP22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 CLDN3O15551 220 aa22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 RECQL4O94761 1208 aa22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 PRPF6O94906 941 aaKnown RBP22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 HARSP12081 509 aaKnown RBP22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 CTNNB1P35222 781 aa22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 GRM5P41594 1212 aa22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 MATR3P43243 847 aaKnown RBP eCLIP22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 AFF1P51825 1210 aaKnown RBP22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 GRIN2CQ14957 1233 aa22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 EPM2AIP1Q7L775 607 aaPredicted RBP22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 ZFP42Q96MM3 310 aa22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 HAPLN2Q9GZV7 340 aa22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 TBC1D13Q9NVG8 400 aa22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 MTMR10Q9NXD2 777 aa22.58■■□□□ 1.21
HMGXB4-203ENST00000420166 EPOPA6NHQ4 379 aa22.57■■□□□ 1.2
HMGXB4-203ENST00000420166 ANKRD63C9JTQ0 380 aa22.57■■□□□ 1.2
HMGXB4-203ENST00000420166 KINO60870 393 aaKnown RBP22.57■■□□□ 1.2
HMGXB4-203ENST00000420166 BMPR1AP36894 532 aa22.57■■□□□ 1.2
HMGXB4-203ENST00000420166 EPC2Q52LR7 807 aa22.57■■□□□ 1.2
HMGXB4-203ENST00000420166 SPOUT1Q5T280 376 aaKnown RBP22.57■■□□□ 1.2
HMGXB4-203ENST00000420166 THNSL1Q8IYQ7 743 aa22.57■■□□□ 1.2
HMGXB4-203ENST00000420166 FBXO22Q8NEZ5 403 aa22.57■■□□□ 1.2
HMGXB4-203ENST00000420166 CCDC94Q9BW85 323 aaPredicted RBP22.57■■□□□ 1.2
HMGXB4-203ENST00000420166 IKZF4Q9H2S9 585 aa22.57■■□□□ 1.2
HMGXB4-203ENST00000420166 PRDM12Q9H4Q4 367 aa22.57■■□□□ 1.2
HMGXB4-203ENST00000420166 SLC39A2Q9NP94 309 aa22.57■■□□□ 1.2
HMGXB4-203ENST00000420166 KLK14Q9P0G3 267 aa22.57■■□□□ 1.2
HMGXB4-203ENST00000420166 KANSL3Q9P2N6 904 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms