RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 EPC2Q52LR7 807 aa25.31■■□□□ 1.64
SMARCB1-205ENST00000417137 MPZL3Q6UWV2 235 aa25.31■■□□□ 1.64
SMARCB1-205ENST00000417137 KRBA2Q6ZNG9 492 aa25.31■■□□□ 1.64
SMARCB1-205ENST00000417137 FBXO22Q8NEZ5 403 aa25.31■■□□□ 1.64
SMARCB1-205ENST00000417137 C17orf80Q9BSJ5 609 aa25.31■■□□□ 1.64
SMARCB1-205ENST00000417137 NXF3Q9H4D5 531 aaKnown RBP25.31■■□□□ 1.64
SMARCB1-205ENST00000417137 MTUS1Q9ULD2 1270 aa25.31■■□□□ 1.64
SMARCB1-205ENST00000417137 INPP5FQ9Y2H2 1132 aa25.31■■□□□ 1.64
SMARCB1-205ENST00000417137 CUL9Q8IWT3 2517 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 HNRNPDLO14979 420 aaKnown RBP25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 CLDN3O15551 220 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 GTPBP6O43824 516 aaPredicted RBP25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 MCF2P10911 925 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 CTNNB1P35222 781 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 MATR3P43243 847 aaKnown RBP eCLIP25.3■■□□□ 1.645e-9■■■■□ 20.1
SMARCB1-205ENST00000417137 FAM160A1Q05DH4 1040 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 CUL4BQ13620 913 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 ZC2HC1CQ53FD0 456 aaPredicted RBP25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 MAP4K3Q8IVH8 894 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 GRAMD1CQ8IYS0 662 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 TMEM87AQ8NBN3 555 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 ACCSQ96QU6 501 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 GAS2L1Q99501 681 aaPredicted RBP25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 PLVAPQ9BX97 442 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 RNF39Q9H2S5 420 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 PRDM12Q9H4Q4 367 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 PCDHB12Q9Y5F1 795 aa25.3■■□□□ 1.64
SMARCB1-205ENST00000417137 CARNS1A5YM72 827 aa25.29■■□□□ 1.64
SMARCB1-205ENST00000417137 MEIS3P2A8K0S8 358 aa25.29■■□□□ 1.64
SMARCB1-205ENST00000417137 PIGRP01833 764 aa25.29■■□□□ 1.64
SMARCB1-205ENST00000417137 LAG3P18627 525 aa25.29■■□□□ 1.64
SMARCB1-205ENST00000417137 PROZP22891 400 aa25.29■■□□□ 1.64
SMARCB1-205ENST00000417137 RNASELQ05823 741 aaKnown RBP25.29■■□□□ 1.64
SMARCB1-205ENST00000417137 ZBTB33Q86T24 672 aa25.29■■□□□ 1.64
SMARCB1-205ENST00000417137 FMR1NBQ8N0W7 255 aaPredicted RBP25.29■■□□□ 1.64
SMARCB1-205ENST00000417137 CCDC47Q96A33 483 aaKnown RBP25.29■■□□□ 1.64
SMARCB1-205ENST00000417137 CDX2Q99626 313 aaPredicted RBP25.29■■□□□ 1.64
SMARCB1-205ENST00000417137 CCDC94Q9BW85 323 aaPredicted RBP25.29■■□□□ 1.64
SMARCB1-205ENST00000417137 CDT1Q9H211 546 aa25.29■■□□□ 1.64
SMARCB1-205ENST00000417137 GBF1Q92538 1859 aa25.29■■□□□ 1.64
SMARCB1-205ENST00000417137 MYH11P35749 1972 aa25.28■■□□□ 1.64
SMARCB1-205ENST00000417137 ARL5CA6NH57 179 aa25.28■■□□□ 1.64
SMARCB1-205ENST00000417137 C5orf67F2Z3F1 127 aa25.28■■□□□ 1.64
SMARCB1-205ENST00000417137 AKAP5P24588 427 aa25.28■■□□□ 1.64
SMARCB1-205ENST00000417137 L1TD1Q5T7N2 865 aaKnown RBP25.28■■□□□ 1.64
SMARCB1-205ENST00000417137 FAM193BQ96PV7 902 aaPredicted RBP25.28■■□□□ 1.64
SMARCB1-205ENST00000417137 GAD1Q99259 594 aa25.28■■□□□ 1.64
SMARCB1-205ENST00000417137 C11orf84Q9BUA3 381 aaPredicted RBP25.28■■□□□ 1.64
SMARCB1-205ENST00000417137 STRA6Q9BX79 667 aa25.28■■□□□ 1.64
SMARCB1-205ENST00000417137 SNTG2Q9NY99 539 aa25.28■■□□□ 1.64
SMARCB1-205ENST00000417137 ANKFY1Q9P2R3 1169 aa25.28■■□□□ 1.64
SMARCB1-205ENST00000417137 ZMYM2Q9UBW7 1377 aa25.28■■□□□ 1.64
SMARCB1-205ENST00000417137 INPPL1O15357 1258 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 PPP1R37O75864 691 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 CASP1P29466 404 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 GRM5P41594 1212 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 YARSP54577 528 aaKnown RBP25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 MCL1Q07820 350 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 NOLC1Q14978 699 aaKnown RBP eCLIP25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 KYAT1Q16773 422 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 FAM26FQ5R3K3 315 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 SLFN12LQ6IEE8 588 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 LRRC55Q6ZSA7 311 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 SPRED2Q7Z698 418 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 ENGASEQ8NFI3 743 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 ZBTB45Q96K62 511 aaPredicted RBP25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 RPS6KC1Q96S38 1066 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 CWH43Q9H720 699 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 TMEM206Q9H813 350 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 TBC1D13Q9NVG8 400 aa25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 HOOK1Q9UJC3 728 aaKnown RBP25.27■■□□□ 1.64
SMARCB1-205ENST00000417137 H3BNC9 293 aa25.26■■□□□ 1.63
SMARCB1-205ENST00000417137 LINC00271P0C7V0 271 aa25.26■■□□□ 1.63
SMARCB1-205ENST00000417137 MLH1P40692 756 aa25.26■■□□□ 1.63
SMARCB1-205ENST00000417137 PSMD2Q13200 908 aa25.26■■□□□ 1.63
SMARCB1-205ENST00000417137 CLEC17AQ6ZS10 378 aa25.26■■□□□ 1.63
SMARCB1-205ENST00000417137 SYCP3Q8IZU3 236 aa25.26■■□□□ 1.63
SMARCB1-205ENST00000417137 P2RX5Q93086 422 aa25.26■■□□□ 1.63
SMARCB1-205ENST00000417137 TIGD1Q96MW7 591 aa25.26■■□□□ 1.63
SMARCB1-205ENST00000417137 ZNF558Q96NG5 402 aa25.26■■□□□ 1.63
SMARCB1-205ENST00000417137 GUCD1Q96NT3 240 aa25.26■■□□□ 1.63
SMARCB1-205ENST00000417137 TOPORSQ9NS56 1045 aaPredicted RBP25.26■■□□□ 1.63
SMARCB1-205ENST00000417137 EXOC1Q9NV70 894 aa25.26■■□□□ 1.63
SMARCB1-205ENST00000417137 GDAQ9Y2T3 454 aa25.26■■□□□ 1.63
SMARCB1-205ENST00000417137 ABLIM1O14639 778 aa25.25■■□□□ 1.63
SMARCB1-205ENST00000417137 MYBP10242 640 aa25.25■■□□□ 1.63
SMARCB1-205ENST00000417137 HARSP12081 509 aaKnown RBP25.25■■□□□ 1.63
SMARCB1-205ENST00000417137 ALDH7A1P49419 539 aaKnown RBP25.25■■□□□ 1.63
SMARCB1-205ENST00000417137 UBE2HP62256 183 aa25.25■■□□□ 1.63
SMARCB1-205ENST00000417137 GPM6BQ13491 265 aa25.25■■□□□ 1.63
SMARCB1-205ENST00000417137 SNW1Q13573 536 aaKnown RBP25.25■■□□□ 1.63
SMARCB1-205ENST00000417137 POSTNQ15063 836 aa25.25■■□□□ 1.63
SMARCB1-205ENST00000417137 THNSL1Q8IYQ7 743 aa25.25■■□□□ 1.63
SMARCB1-205ENST00000417137 COLGALT1Q8NBJ5 622 aa25.25■■□□□ 1.63
SMARCB1-205ENST00000417137 ACAP3Q96P50 834 aa25.25■■□□□ 1.63
SMARCB1-205ENST00000417137 KLK14Q9P0G3 267 aa25.25■■□□□ 1.63
SMARCB1-205ENST00000417137 EIF3DO15371 548 aaKnown RBP eCLIP25.24■■□□□ 1.63
SMARCB1-205ENST00000417137 RECQL4O94761 1208 aa25.24■■□□□ 1.63
SMARCB1-205ENST00000417137 POMCP01189 267 aa25.24■■□□□ 1.63
SMARCB1-205ENST00000417137 CASP5P51878 434 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms