RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 PARP2Q9UGN5 583 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 PCDHAC2Q9Y5I4 1007 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 PITPNM2Q9BZ72 1349 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 MAPK13O15264 365 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 BBOX1O75936 387 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 ATP5DP30049 168 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 VPS41P49754 854 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 DPP8Q6V1X1 898 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 DEFB132Q7Z7B7 95 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 APLFQ8IW19 511 aaPredicted RBP15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 CYP4X1Q8N118 509 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 KRT35Q92764 455 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 BICD1Q96G01 975 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 DCLRE1BQ9H816 532 aa15.74■□□□□ 0.11
NCKIPSD-204ENST00000416649 DOCK2Q92608 1830 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 FAM196BA6NMK8 535 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 SLC37A4O43826 429 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 TAC1P20366 129 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 ATP2B4P23634 1241 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 PTGIRP43119 386 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 RRP1BQ14684 758 aaKnown RBP15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 TRIP13Q15645 432 aaPredicted RBP15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 ECM1Q16610 540 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 RFFLQ8WZ73 363 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 TMEM165Q9HC07 324 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 EMILIN3Q9NT22 766 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 USP40Q9NVE5 1235 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 GCNT4Q9P109 453 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 UBR3Q6ZT12 1888 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 CCDC88AQ3V6T2 1871 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 CAPN9O14815 690 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 KRT36O76013 467 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 RBM26Q5T8P6 1007 aaKnown RBP15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 MFSD5Q6N075 450 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 USP17L2Q6R6M4 530 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 LNX1Q8TBB1 728 aaPredicted RBP15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 FAM136AQ96C01 138 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 SLC7A6OSQ96CW6 309 aaPredicted RBP15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 MAGEB18Q96M61 343 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 ADAM33Q9BZ11 813 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 C6orf50Q9HD87 102 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 SEC63Q9UGP8 760 aaKnown RBP15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 MAD2L2Q9UI95 211 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 BCS1LQ9Y276 419 aa15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.73■□□□□ 0.11
NCKIPSD-204ENST00000416649 DUOX1Q9NRD9 1551 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 TCRBV7S2A1N4TA0A589 114 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 ATP5HO75947 161 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 XRCC5P13010 732 aaKnown RBP15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 CHRNA3P32297 505 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 STRN3Q13033 797 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 OPTNQ96CV9 577 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 PWWP2AQ96N64 755 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 TMEM109Q9BVC6 243 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 THAP2Q9H0W7 228 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 ASIC3Q9UHC3 531 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 PHTF1Q9UMS5 762 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 E9PMD0 336 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 PODXLO00592 558 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 BAG3O95817 575 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 STAT1P42224 750 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 RASSF2P50749 326 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 MCL1Q07820 350 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 TNFAIP8L3Q5GJ75 292 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 DSTYKQ6XUX3 929 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 ENDOVQ8N8Q3 282 aaKnown RBP15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 AKT1S1Q96B36 256 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 MRRFQ96E11 262 aaKnown RBP15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 TRAPPC9Q96Q05 1148 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 RAB34Q9BZG1 259 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 ROPN1BQ9BZX4 212 aaPredicted RBP15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 ROPN1Q9HAT0 212 aaPredicted RBP15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 TTC7AQ9ULT0 858 aaPredicted RBP15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 SUGT1Q9Y2Z0 365 aa15.72■□□□□ 0.11
NCKIPSD-204ENST00000416649 KLRF2D3W0D1 207 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 THAP12O43422 761 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 MARK3P27448 753 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 DRG2P55039 364 aaKnown RBP15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 IL9RQ01113 521 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 MKRN3Q13064 507 aaKnown RBP15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 TAF1BQ53T94 588 aaPredicted RBP15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 PPFIBP2Q8ND30 876 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 FBXO41Q8TF61 875 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 SCFD1Q8WVM8 642 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 DNAJC19Q96DA6 116 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 DYDC2Q96IM9 177 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 PREBQ9HCU5 417 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.71■□□□□ 0.119e-29■■■■■ 531
NCKIPSD-204ENST00000416649 TAS2R14Q9NYV8 317 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 A0A0A6YYK5 440 aaPredicted RBP15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 TTC36A6NLP5 189 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 RGL2O15211 777 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 TJP3O95049 919 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 GSTA2P09210 222 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 CHKAP35790 457 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 CDR2Q01850 454 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 TMED2Q15363 201 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 CERKLQ49MI3 558 aaPredicted RBP15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 WASHC2DQ5SRD0 308 aa15.71■□□□□ 0.11
NCKIPSD-204ENST00000416649 PRUNE1Q86TP1 453 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms