RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 GLIS3Q8NEA6 775 aa21.68■■□□□ 1.06
FAM3A-207ENST00000416319 SMARCE1Q969G3 411 aa21.68■■□□□ 1.06
FAM3A-207ENST00000416319 TCHPQ9BT92 498 aa21.68■■□□□ 1.06
FAM3A-207ENST00000416319 TMEM117Q9H0C3 514 aa21.68■■□□□ 1.06
FAM3A-207ENST00000416319 RNF19AQ9NV58 838 aa21.68■■□□□ 1.06
FAM3A-207ENST00000416319 GIT1Q9Y2X7 761 aa21.68■■□□□ 1.06
FAM3A-207ENST00000416319 COL4A6Q14031 1691 aa21.68■■□□□ 1.06
FAM3A-207ENST00000416319 A0A0B4J269 797 aa21.67■■□□□ 1.06
FAM3A-207ENST00000416319 PRPF6O94906 941 aaKnown RBP21.67■■□□□ 1.06
FAM3A-207ENST00000416319 KIF20AO95235 890 aa21.67■■□□□ 1.06
FAM3A-207ENST00000416319 ITGA4P13612 1032 aa21.67■■□□□ 1.06
FAM3A-207ENST00000416319 RABGGTBP53611 331 aa21.67■■□□□ 1.06
FAM3A-207ENST00000416319 KYAT1Q16773 422 aa21.67■■□□□ 1.06
FAM3A-207ENST00000416319 FAM117BQ6P1L5 589 aa21.67■■□□□ 1.06
FAM3A-207ENST00000416319 SLC39A4Q6P5W5 647 aa21.67■■□□□ 1.06
FAM3A-207ENST00000416319 AGMOQ6ZNB7 445 aa21.67■■□□□ 1.06
FAM3A-207ENST00000416319 CLSTN2Q9H4D0 955 aa21.67■■□□□ 1.06
FAM3A-207ENST00000416319 NXF3Q9H4D5 531 aaKnown RBP21.67■■□□□ 1.06
FAM3A-207ENST00000416319 MYH11P35749 1972 aa21.67■■□□□ 1.06
FAM3A-207ENST00000416319 FGFR1P11362 822 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 HOXD13P35453 343 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 GRM5P41594 1212 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 CLLU1OSQ5K130 101 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 GLB1LQ6UWU2 654 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 ABI1Q8IZP0 508 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 SYCP3Q8IZU3 236 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 RNF169Q8NCN4 708 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 GPT2Q8TD30 523 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 ZBTB45Q96K62 511 aaPredicted RBP21.66■■□□□ 1.06
FAM3A-207ENST00000416319 CASD1Q96PB1 797 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 GBP3Q9H0R5 595 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 RNF39Q9H2S5 420 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 RSAD1Q9HA92 442 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 CGNQ9P2M7 1197 aaKnown RBP21.66■■□□□ 1.06
FAM3A-207ENST00000416319 ANKFY1Q9P2R3 1169 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 HES2Q9Y543 173 aa21.66■■□□□ 1.06
FAM3A-207ENST00000416319 TMEM265A0A087WTH1 108 aa21.65■■□□□ 1.06
FAM3A-207ENST00000416319 OFD1O75665 1012 aa21.65■■□□□ 1.06
FAM3A-207ENST00000416319 GARTP22102 1010 aa21.65■■□□□ 1.06
FAM3A-207ENST00000416319 DNAJB2P25686 324 aa21.65■■□□□ 1.06
FAM3A-207ENST00000416319 PBX2P40425 430 aa21.65■■□□□ 1.06
FAM3A-207ENST00000416319 COBLL1Q53SF7 1204 aa21.65■■□□□ 1.06
FAM3A-207ENST00000416319 GPR153Q6NV75 609 aa21.65■■□□□ 1.06
FAM3A-207ENST00000416319 LPPQ93052 612 aa21.65■■□□□ 1.06
FAM3A-207ENST00000416319 MRPL9Q9BYD2 267 aaKnown RBP21.65■■□□□ 1.06
FAM3A-207ENST00000416319 YBX2Q9Y2T7 364 aaKnown RBP21.65■■□□□ 1.06
FAM3A-207ENST00000416319 MEIS3P2A8K0S8 358 aa21.64■■□□□ 1.05
FAM3A-207ENST00000416319 ANKRD63C9JTQ0 380 aa21.64■■□□□ 1.05
FAM3A-207ENST00000416319 KIAA0391O15091 583 aaKnown RBP21.64■■□□□ 1.05
FAM3A-207ENST00000416319 PTMSP20962 102 aa21.64■■□□□ 1.05
FAM3A-207ENST00000416319 IBSPP21815 317 aaPredicted RBP21.64■■□□□ 1.05
FAM3A-207ENST00000416319 ADSSP30520 456 aa21.64■■□□□ 1.05
FAM3A-207ENST00000416319 POU5F1Q01860 360 aaKnown RBP21.64■■□□□ 1.05
FAM3A-207ENST00000416319 BTG3Q14201 252 aaPredicted RBP21.64■■□□□ 1.05
FAM3A-207ENST00000416319 KNOP1Q1ED39 458 aaKnown RBP21.64■■□□□ 1.05
FAM3A-207ENST00000416319 ZNF658Q5TYW1 1059 aaPredicted RBP21.64■■□□□ 1.05
FAM3A-207ENST00000416319 ZBTB33Q86T24 672 aa21.64■■□□□ 1.05
FAM3A-207ENST00000416319 GUF1Q8N442 669 aaKnown RBP21.64■■□□□ 1.05
FAM3A-207ENST00000416319 GOLGA5Q8TBA6 731 aa21.64■■□□□ 1.05
FAM3A-207ENST00000416319 TMEM174Q8WUU8 243 aa21.64■■□□□ 1.05
FAM3A-207ENST00000416319 TIFAQ96CG3 184 aa21.64■■□□□ 1.05
FAM3A-207ENST00000416319 CCDC94Q9BW85 323 aaPredicted RBP21.64■■□□□ 1.05
FAM3A-207ENST00000416319 HAPLN2Q9GZV7 340 aa21.64■■□□□ 1.05
FAM3A-207ENST00000416319 KIAA1468Q9P260 1216 aa21.64■■□□□ 1.05
FAM3A-207ENST00000416319 KANSL3Q9P2N6 904 aa21.64■■□□□ 1.05
FAM3A-207ENST00000416319 TBKBP1A7MCY6 615 aa21.63■■□□□ 1.05
FAM3A-207ENST00000416319 OGTO15294 1046 aa21.63■■□□□ 1.05
FAM3A-207ENST00000416319 FAM189A1O60320 539 aa21.63■■□□□ 1.05
FAM3A-207ENST00000416319 CA3P07451 260 aa21.63■■□□□ 1.05
FAM3A-207ENST00000416319 MYOGP15173 224 aa21.63■■□□□ 1.05
FAM3A-207ENST00000416319 NOMO2Q5JPE7 1267 aa21.63■■□□□ 1.05
FAM3A-207ENST00000416319 LRRC43Q8N309 656 aa21.63■■□□□ 1.05
FAM3A-207ENST00000416319 FIBCD1Q8N539 461 aa21.63■■□□□ 1.05
FAM3A-207ENST00000416319 HELQQ8TDG4 1101 aa21.63■■□□□ 1.05
FAM3A-207ENST00000416319 ERCC4Q92889 916 aaPredicted RBP21.63■■□□□ 1.05
FAM3A-207ENST00000416319 CLP1Q92989 425 aaKnown RBP21.63■■□□□ 1.05
FAM3A-207ENST00000416319 MSTO1Q9BUK6 570 aa21.63■■□□□ 1.05
FAM3A-207ENST00000416319 NUP62CLQ9H1M0 184 aa21.63■■□□□ 1.05
FAM3A-207ENST00000416319 TOPORSQ9NS56 1045 aaPredicted RBP21.63■■□□□ 1.05
FAM3A-207ENST00000416319 SNTG2Q9NY99 539 aa21.63■■□□□ 1.05
FAM3A-207ENST00000416319 LCHNA4D1U4 455 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 SOX1O00570 391 aaPredicted RBP21.62■■□□□ 1.05
FAM3A-207ENST00000416319 TGFB1I1O43294 461 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 RECQL4O94761 1208 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 CLTAP09496 248 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 AKAP5P24588 427 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 MATR3P43243 847 aaKnown RBP eCLIP21.62■■□□□ 1.05
FAM3A-207ENST00000416319 GATMP50440 423 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 CAMK4Q16566 473 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 HS2ST1Q7LGA3 356 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 C12orf56Q8IXR9 622 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 TRIML1Q8N9V2 468 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 URGCPQ8TCY9 931 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 POMGNT1Q8WZA1 660 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 ACAP3Q96P50 834 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 IKZF4Q9H2S9 585 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 SLC28A3Q9HAS3 691 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 PARP2Q9UGN5 583 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 MAN1B1Q9UKM7 699 aa21.62■■□□□ 1.05
FAM3A-207ENST00000416319 GDAQ9Y2T3 454 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms