RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 BMP2KQ9NSY1 1161 aaPredicted RBP18.51■□□□□ 0.55
SF1-207ENST00000413951 IPPQ9Y573 584 aa18.51■□□□□ 0.55
SF1-207ENST00000413951 TSPAN1O60635 241 aa18.5■□□□□ 0.55
SF1-207ENST00000413951 DDHD2O94830 711 aa18.5■□□□□ 0.55
SF1-207ENST00000413951 TXKP42681 527 aa18.5■□□□□ 0.55
SF1-207ENST00000413951 OR1G1P47890 313 aa18.5■□□□□ 0.55
SF1-207ENST00000413951 CLCN4P51793 760 aa18.5■□□□□ 0.55
SF1-207ENST00000413951 ZNF174Q15697 407 aa18.5■□□□□ 0.55
SF1-207ENST00000413951 HERC2P3Q9BVR0 1158 aa18.5■□□□□ 0.55
SF1-207ENST00000413951 ZMYM2Q9UBW7 1377 aa18.5■□□□□ 0.55
SF1-207ENST00000413951 ARL5CA6NH57 179 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 LAD1O00515 517 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 CNPP09543 421 aaKnown RBP18.49■□□□□ 0.55
SF1-207ENST00000413951 OR52Z1P0C646 297 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 ARL2P36404 184 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 RARRES1P49788 294 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 CREMQ03060 361 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 TMC5Q6UXY8 1006 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 COLGALT2Q8IYK4 626 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 GPR65Q8IYL9 337 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 C12orf76Q8N812 135 aaPredicted RBP18.49■□□□□ 0.55
SF1-207ENST00000413951 SMG8Q8ND04 991 aaKnown RBP18.49■□□□□ 0.55
SF1-207ENST00000413951 MCPH1Q8NEM0 835 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 PRSS33Q8NF86 280 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 CMASQ8NFW8 434 aaPredicted RBP18.49■□□□□ 0.55
SF1-207ENST00000413951 ERMNQ8TAM6 284 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 BCL7CQ8WUZ0 217 aaPredicted RBP18.49■□□□□ 0.55
SF1-207ENST00000413951 STAMQ92783 540 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 PRIMPOLQ96LW4 560 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 RPS6KC1Q96S38 1066 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 RHOBTB2Q9BYZ6 727 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.49■□□□□ 0.55
SF1-207ENST00000413951 MORC2Q9Y6X9 1032 aaPredicted RBP18.49■□□□□ 0.55
SF1-207ENST00000413951 ZNF318Q5VUA4 2279 aa18.49■□□□□ 0.55
SF1-207ENST00000413951 LILRB3O75022 631 aa18.48■□□□□ 0.55
SF1-207ENST00000413951 SSBP05455 408 aaKnown RBP eCLIP18.48■□□□□ 0.55
SF1-207ENST00000413951 GLUD2P49448 558 aa18.48■□□□□ 0.55
SF1-207ENST00000413951 ATP2C1P98194 919 aaPredicted RBP18.48■□□□□ 0.55
SF1-207ENST00000413951 MBTD1Q05BQ5 628 aa18.48■□□□□ 0.55
SF1-207ENST00000413951 PTGDRQ13258 359 aa18.48■□□□□ 0.55
SF1-207ENST00000413951 IER5LQ5T953 404 aa18.48■□□□□ 0.55
SF1-207ENST00000413951 FAM173BQ6P4H8 233 aa18.48■□□□□ 0.55
SF1-207ENST00000413951 SLC27A1Q6PCB7 646 aa18.48■□□□□ 0.55
SF1-207ENST00000413951 HDAC7Q8WUI4 952 aa18.48■□□□□ 0.55
SF1-207ENST00000413951 GAD1Q99259 594 aa18.48■□□□□ 0.55
SF1-207ENST00000413951 TUFT1Q9NNX1 390 aa18.48■□□□□ 0.55
SF1-207ENST00000413951 XPNPEP1Q9NQW7 623 aa18.48■□□□□ 0.55
SF1-207ENST00000413951 PRG3Q9Y2Y8 225 aaPredicted RBP18.48■□□□□ 0.55
SF1-207ENST00000413951 ZBTB39O15060 712 aa18.47■□□□□ 0.55
SF1-207ENST00000413951 BMP15O95972 392 aa18.47■□□□□ 0.55
SF1-207ENST00000413951 GLUD1P00367 558 aa18.47■□□□□ 0.55
SF1-207ENST00000413951 MLH1P40692 756 aa18.47■□□□□ 0.55
SF1-207ENST00000413951 PRPHP41219 470 aa18.47■□□□□ 0.55
SF1-207ENST00000413951 DSC1Q08554 894 aa18.47■□□□□ 0.55
SF1-207ENST00000413951 CAPSQ13938 189 aa18.47■□□□□ 0.55
SF1-207ENST00000413951 ZBTB8OSQ8IWT0 167 aa18.47■□□□□ 0.55
SF1-207ENST00000413951 NACC1Q96RE7 527 aa18.47■□□□□ 0.55
SF1-207ENST00000413951 VN1R3Q9BXE9 311 aa18.47■□□□□ 0.55
SF1-207ENST00000413951 EIF2AQ9BY44 585 aaKnown RBP18.47■□□□□ 0.55
SF1-207ENST00000413951 C2orf40Q9H1Z8 148 aa18.47■□□□□ 0.55
SF1-207ENST00000413951 MFSD1Q9H3U5 465 aa18.47■□□□□ 0.55
SF1-207ENST00000413951 PRMT7Q9NVM4 692 aaPredicted RBP18.47■□□□□ 0.55
SF1-207ENST00000413951 LIMD1Q9UGP4 676 aa18.47■□□□□ 0.55
SF1-207ENST00000413951 A0A1B0GUA9 196 aa18.46■□□□□ 0.55
SF1-207ENST00000413951 WEE2P0C1S8 567 aa18.46■□□□□ 0.55
SF1-207ENST00000413951 ARF4P18085 180 aaPredicted RBP18.46■□□□□ 0.55
SF1-207ENST00000413951 GLRA2P23416 452 aa18.46■□□□□ 0.55
SF1-207ENST00000413951 AFF1P51825 1210 aaKnown RBP18.46■□□□□ 0.55
SF1-207ENST00000413951 NUCB2P80303 420 aa18.46■□□□□ 0.55
SF1-207ENST00000413951 GRIK3Q13003 919 aa18.46■□□□□ 0.55
SF1-207ENST00000413951 PTPAQ15257 358 aa18.46■□□□□ 0.55
SF1-207ENST00000413951 CPB2Q96IY4 423 aa18.46■□□□□ 0.55
SF1-207ENST00000413951 POLR3FQ9H1D9 316 aaPredicted RBP18.46■□□□□ 0.55
SF1-207ENST00000413951 PLEKHA4Q9H4M7 779 aa18.46■□□□□ 0.55
SF1-207ENST00000413951 RXFP1Q9HBX9 757 aa18.46■□□□□ 0.55
SF1-207ENST00000413951 IGSF9Q9P2J2 1179 aa18.46■□□□□ 0.55
SF1-207ENST00000413951 CIZ1Q9ULV3 898 aaPredicted RBP18.46■□□□□ 0.55
SF1-207ENST00000413951 C2CD2LO14523 706 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 B4GALT3O60512 393 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 NASPP49321 788 aaPredicted RBP18.45■□□□□ 0.54
SF1-207ENST00000413951 FXR2P51116 673 aaKnown RBP eCLIP18.45■□□□□ 0.544e-18■■□□□ 13.9
SF1-207ENST00000413951 SCNN1GP51170 649 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 VCPP55072 806 aaKnown RBP18.45■□□□□ 0.54
SF1-207ENST00000413951 DSG1Q02413 1049 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 TCF15Q12870 199 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 TDGQ13569 410 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 SF3A1Q15459 793 aaKnown RBP18.45■□□□□ 0.54
SF1-207ENST00000413951 USP41Q3LFD5 358 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 ARL6IP4Q66PJ3 421 aaKnown RBP18.45■□□□□ 0.54
SF1-207ENST00000413951 PPP4R3CPQ6ZMV5 832 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 ASAP3Q8TDY4 903 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 ATOH1Q92858 354 aaPredicted RBP18.45■□□□□ 0.54
SF1-207ENST00000413951 USP28Q96RU2 1077 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 APOL6Q9BWW8 343 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 MAN1C1Q9NR34 630 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 MARCH5Q9NX47 278 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 CDH22Q9UJ99 828 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 STK24Q9Y6E0 443 aa18.45■□□□□ 0.54
SF1-207ENST00000413951 LRRIQ4A6NIV6 560 aa18.44■□□□□ 0.54
SF1-207ENST00000413951 TEX28O15482 410 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms