RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 RHPN2P1A8MT19 583 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 COL6A1P12109 1028 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 POLD1P28340 1107 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 IL13P35225 146 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 STK3Q13188 491 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 ADAM15Q13444 863 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 MLANAQ16655 118 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 APOA5Q6Q788 366 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 GADL1Q6ZQY3 521 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 TAS1R1Q7RTX1 841 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 UNC5BQ8IZJ1 945 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 MSL3Q8N5Y2 521 aaKnown RBP5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 LINC00482Q8N8I6 264 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 ENAHQ8N8S7 591 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 ZCCHC14Q8WYQ9 949 aaKnown RBP5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 HOXB13Q92826 284 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 PGBD4Q96DM1 585 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 SLC35A4Q96G79 324 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 PDCD2LQ9BRP1 358 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 ZMAT3Q9HA38 289 aaKnown RBP5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 CORO2BQ9UQ03 480 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 SNX13Q9Y5W8 968 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 PMF1-BGLAPU3KQ54 211 aa5.91□□□□□ -1.46
HMGB3P31-201ENST00000413333 A0A1W2PPL8 197 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 F5H423 210 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 KPNA5O15131 536 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 ALDH1A2O94788 518 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 CHGBP05060 677 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 SETSIPP0DME0 302 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 MYF5P13349 255 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 SMARCA1P28370 1054 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 PIK3CBP42338 1070 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 TRAPPC10P48553 1259 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 MEOX1P50221 254 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 RRADP55042 308 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 NKX6-1P78426 367 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 TOP3AQ13472 1001 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 POLD3Q15054 466 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 EIF4HQ15056 248 aaKnown RBP5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 MST1LQ2TV78 715 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 FAM83BQ5T0W9 1011 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 GJC2Q5T442 439 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 ARTNQ5T4W7 220 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 NUDT10Q8NFP7 164 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 FBXO18Q8NFZ0 1043 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 ZNF480Q8WV37 535 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 GFM2Q969S9 779 aaKnown RBP5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 MTFMTQ96DP5 389 aaKnown RBP5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 NUDT11Q96G61 164 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 MRGPRX4Q96LA9 322 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 DMRTA2Q96SC8 542 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 C22orf23Q9BZE7 217 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 SENP6Q9GZR1 1112 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 C14orf93Q9H972 538 aaKnown RBP5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 L2HGDHQ9H9P8 463 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 ATP6V0A4Q9HBG4 840 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 EPB41L4AQ9HCS5 686 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 PNPOQ9NVS9 261 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 ING3Q9NXR8 418 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 CPA4Q9UI42 421 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 TPCN1Q9ULQ1 816 aa5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 RBM8AQ9Y5S9 174 aaKnown RBP5.9□□□□□ -1.46
HMGB3P31-201ENST00000413333 DDX3XO00571 662 aaKnown RBP eCLIP5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 PHGDHO43175 533 aaKnown RBP5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 TCEA3O75764 348 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 PLA2G1BP04054 148 aaKnown RBP5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 KITP10721 976 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 SREBF1P36956 1147 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 TM4SF4P48230 202 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 PRIM2P49643 509 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 SESN2P58004 480 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 SNAPC2Q13487 334 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 PLS1Q14651 629 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 RAB39AQ14964 217 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 PCOLCEQ15113 449 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 C19orf54Q5BKX5 351 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 LARP4Q71RC2 724 aaKnown RBP eCLIP5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 ZGPATQ8N5A5 531 aaKnown RBP5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 PLA2G15Q8NCC3 412 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 REPS2Q8NFH8 660 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 OR7D4Q8NG98 312 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 STON2Q8WXE9 905 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 GCDHQ92947 438 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 SGCZQ96LD1 299 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 RIPOR3Q96MK2 946 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 SAMD11Q96NU1 681 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 LRRC27Q9C0I9 530 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 RSAD1Q9HA92 442 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 ZFP64Q9NPA5 681 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 LANCL2Q9NS86 450 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 SPATA6Q9NWH7 488 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 FEZ2Q9UHY8 353 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 PCDHA1Q9Y5I3 950 aa5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 MYBBP1AQ9BQG0 1328 aaKnown RBP5.89□□□□□ -1.47
HMGB3P31-201ENST00000413333 ABHD14A-ACY1A0A1B0GW23 586 aa5.88□□□□□ -1.47
HMGB3P31-201ENST00000413333 C2orf78A6NCI8 922 aa5.88□□□□□ -1.47
HMGB3P31-201ENST00000413333 ADCY6O43306 1168 aa5.88□□□□□ -1.47
HMGB3P31-201ENST00000413333 SEMA7AO75326 666 aa5.88□□□□□ -1.47
HMGB3P31-201ENST00000413333 KLHL18O94889 574 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms