RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 TSG101Q99816 390 aa22.54■■□□□ 1.2
C4orf48-202ENST00000409860 ANO10Q9NW15 660 aa22.54■■□□□ 1.2
C4orf48-202ENST00000409860 A0A0B4J269 797 aa22.53■■□□□ 1.2
C4orf48-202ENST00000409860 PPP1R3GB7ZBB8 358 aa22.53■■□□□ 1.2
C4orf48-202ENST00000409860 KIAA0391O15091 583 aaKnown RBP22.53■■□□□ 1.2
C4orf48-202ENST00000409860 ZNF623O75123 536 aa22.53■■□□□ 1.2
C4orf48-202ENST00000409860 STAG3L1P0CL83 205 aa22.53■■□□□ 1.2
C4orf48-202ENST00000409860 CD44P16070 742 aaKnown RBP22.53■■□□□ 1.2
C4orf48-202ENST00000409860 FAM189BP81408 668 aa22.53■■□□□ 1.2
C4orf48-202ENST00000409860 DPCR1Q3MIW9 517 aa22.53■■□□□ 1.2
C4orf48-202ENST00000409860 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.53■■□□□ 1.2
C4orf48-202ENST00000409860 PGBD4Q96DM1 585 aa22.53■■□□□ 1.2
C4orf48-202ENST00000409860 ELAC1Q9H777 363 aaKnown RBP22.53■■□□□ 1.2
C4orf48-202ENST00000409860 LRFN2Q9ULH4 789 aa22.53■■□□□ 1.2
C4orf48-202ENST00000409860 CTNND2Q9UQB3 1225 aa22.53■■□□□ 1.2
C4orf48-202ENST00000409860 IPPQ9Y573 584 aa22.53■■□□□ 1.2
C4orf48-202ENST00000409860 SYCE3A1L190 88 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 CCNE1P24864 410 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 ADSSP30520 456 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 PAK1Q13153 545 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 KYAT1Q16773 422 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 ZSCAN23Q3MJ62 389 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 NPAS4Q8IUM7 802 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 C12orf56Q8IXR9 622 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 RNF169Q8NCN4 708 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 NELFBQ8WX92 580 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 P2RX5Q93086 422 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 RNPC3Q96LT9 517 aaKnown RBP22.52■■□□□ 1.2
C4orf48-202ENST00000409860 CBWD1Q9BRT8 395 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 NXF3Q9H4D5 531 aaKnown RBP22.52■■□□□ 1.2
C4orf48-202ENST00000409860 TMEM161AQ9NX61 479 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 AGO2Q9UKV8 859 aaKnown RBP22.52■■□□□ 1.2
C4orf48-202ENST00000409860 TRAF3IP3Q9Y228 551 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 PCDHB7Q9Y5E2 793 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 SLC4A7Q9Y6M7 1214 aa22.52■■□□□ 1.2
C4orf48-202ENST00000409860 BICDL2A1A5D9 508 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 CLIC2O15247 247 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 OGTO15294 1046 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 EOMESO95936 686 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 CCDC192P0DO97 292 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 ITGA4P13612 1032 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 BMP8BP34820 402 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 GRM5P41594 1212 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 DEFB103AP81534 67 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 LRRC63Q05C16 580 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 TYRO3Q06418 890 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 HSP90AA2PQ14568 343 aaPredicted RBP22.51■■□□□ 1.19
C4orf48-202ENST00000409860 C9orf50Q5SZB4 431 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 CENPPQ6IPU0 288 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 MRPL10Q7Z7H8 261 aaKnown RBP22.51■■□□□ 1.19
C4orf48-202ENST00000409860 THNSL1Q8IYQ7 743 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 SMG8Q8ND04 991 aaKnown RBP22.51■■□□□ 1.19
C4orf48-202ENST00000409860 SLC9A7Q96T83 725 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 CCDC94Q9BW85 323 aaPredicted RBP22.51■■□□□ 1.19
C4orf48-202ENST00000409860 APOL6Q9BWW8 343 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 HAPLN2Q9GZV7 340 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 SEMA6BQ9H3T3 888 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 CXXC1Q9P0U4 656 aaPredicted RBP22.51■■□□□ 1.19
C4orf48-202ENST00000409860 PDE4DIPQ5VU43 2346 aa22.51■■□□□ 1.19
C4orf48-202ENST00000409860 CEP290O15078 2479 aa22.5■■□□□ 1.19
C4orf48-202ENST00000409860 LDHAP00338 332 aaKnown RBP22.5■■□□□ 1.19
C4orf48-202ENST00000409860 NR3C1P04150 777 aa22.5■■□□□ 1.19
C4orf48-202ENST00000409860 SHHQ15465 462 aa22.5■■□□□ 1.19
C4orf48-202ENST00000409860 EDRF1Q3B7T1 1238 aa22.5■■□□□ 1.19
C4orf48-202ENST00000409860 ZCWPW2Q504Y3 356 aa22.5■■□□□ 1.19
C4orf48-202ENST00000409860 CT47A1Q5JQC4 288 aaPredicted RBP22.5■■□□□ 1.19
C4orf48-202ENST00000409860 RASIP1Q5U651 963 aa22.5■■□□□ 1.19
C4orf48-202ENST00000409860 ZNF598Q86UK7 904 aaKnown RBP22.5■■□□□ 1.19
C4orf48-202ENST00000409860 PCIF1Q9H4Z3 704 aa22.5■■□□□ 1.19
C4orf48-202ENST00000409860 HSPBP1Q9NZL4 362 aa22.5■■□□□ 1.19
C4orf48-202ENST00000409860 HES2Q9Y543 173 aa22.5■■□□□ 1.19
C4orf48-202ENST00000409860 HOXA2O43364 376 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 CLTAP09496 248 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 ATF7P17544 494 aaPredicted RBP22.49■■□□□ 1.19
C4orf48-202ENST00000409860 RPL13P26373 211 aaKnown RBP22.49■■□□□ 1.19
C4orf48-202ENST00000409860 CYP2J2P51589 502 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 YARSP54577 528 aaKnown RBP22.49■■□□□ 1.19
C4orf48-202ENST00000409860 OSTNP61366 133 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 MYBPC2Q14324 1141 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 NFIL3Q16649 462 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 CEP120Q8N960 986 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 PHOSPHO2Q8TCD6 241 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 TOP1MTQ969P6 601 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 SAAL1Q96ER3 474 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 ACAP3Q96P50 834 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 UBN1Q9NPG3 1134 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 SNTG2Q9NY99 539 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 PARP2Q9UGN5 583 aa22.49■■□□□ 1.19
C4orf48-202ENST00000409860 EXTL3O43909 919 aa22.48■■□□□ 1.19
C4orf48-202ENST00000409860 UPP2O95045 317 aa22.48■■□□□ 1.19
C4orf48-202ENST00000409860 ERCC5P28715 1186 aaPredicted RBP22.48■■□□□ 1.19
C4orf48-202ENST00000409860 ANKRD40Q6AI12 368 aa22.48■■□□□ 1.19
C4orf48-202ENST00000409860 FOXR2Q6PJQ5 311 aa22.48■■□□□ 1.19
C4orf48-202ENST00000409860 SLC9A9Q8IVB4 645 aa22.48■■□□□ 1.19
C4orf48-202ENST00000409860 GPD1LQ8N335 351 aa22.48■■□□□ 1.19
C4orf48-202ENST00000409860 XXYLT1Q8NBI6 393 aa22.48■■□□□ 1.19
C4orf48-202ENST00000409860 NOC3LQ8WTT2 800 aaKnown RBP22.48■■□□□ 1.19
C4orf48-202ENST00000409860 TMEM174Q8WUU8 243 aa22.48■■□□□ 1.19
C4orf48-202ENST00000409860 LPPQ93052 612 aa22.48■■□□□ 1.19
C4orf48-202ENST00000409860 FAM213AQ9BRX8 229 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms