RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PRAMEF14Q5SWL7 426 aa5.59□□□□□ -1.52
PMS1-203ENST00000409593 CRIP3Q6Q6R5 217 aa5.59□□□□□ -1.52
PMS1-203ENST00000409593 PDZD4Q76G19 769 aaPredicted RBP5.59□□□□□ -1.52
PMS1-203ENST00000409593 REPS2Q8NFH8 660 aa5.59□□□□□ -1.52
PMS1-203ENST00000409593 FBXO18Q8NFZ0 1043 aa5.59□□□□□ -1.52
PMS1-203ENST00000409593 MENTQ9BUN1 341 aa5.59□□□□□ -1.52
PMS1-203ENST00000409593 LSM14BQ9BX40 385 aaKnown RBP5.59□□□□□ -1.52
PMS1-203ENST00000409593 PARPBPQ9NWS1 579 aa5.59□□□□□ -1.52
PMS1-203ENST00000409593 MKS1Q9NXB0 559 aa5.59□□□□□ -1.52
PMS1-203ENST00000409593 DNM3Q9UQ16 869 aa5.59□□□□□ -1.52
PMS1-203ENST00000409593 PCDHGA2Q9Y5H1 932 aa5.59□□□□□ -1.52
PMS1-203ENST00000409593 GPR45Q9Y5Y3 372 aa5.59□□□□□ -1.52
PMS1-203ENST00000409593 GASTP01350 101 aa5.58□□□□□ -1.52
PMS1-203ENST00000409593 MYBL2P10244 700 aa5.58□□□□□ -1.52
PMS1-203ENST00000409593 CRHR1P34998 444 aa5.58□□□□□ -1.52
PMS1-203ENST00000409593 MTMR1Q13613 665 aa5.58□□□□□ -1.52
PMS1-203ENST00000409593 ACAP2Q15057 778 aa5.58□□□□□ -1.52
PMS1-203ENST00000409593 NOMO1Q15155 1222 aa5.58□□□□□ -1.52
PMS1-203ENST00000409593 LSM12Q3MHD2 195 aaKnown RBP5.58□□□□□ -1.52
PMS1-203ENST00000409593 DCAF17Q5H9S7 520 aaPredicted RBP5.58□□□□□ -1.52
PMS1-203ENST00000409593 MIIPQ5JXC2 388 aa5.58□□□□□ -1.52
PMS1-203ENST00000409593 C1QL3Q5VWW1 255 aa5.58□□□□□ -1.52
PMS1-203ENST00000409593 ZNF503Q96F45 646 aa5.58□□□□□ -1.52
PMS1-203ENST00000409593 CPEB1Q9BZB8 566 aaKnown RBP5.58□□□□□ -1.52
PMS1-203ENST00000409593 SPON1Q9HCB6 807 aa5.58□□□□□ -1.52
PMS1-203ENST00000409593 PCDH12Q9NPG4 1184 aa5.58□□□□□ -1.52
PMS1-203ENST00000409593 RBM12Q9NTZ6 932 aaKnown RBP5.58□□□□□ -1.52
PMS1-203ENST00000409593 TRPS1Q9UHF7 1281 aa5.58□□□□□ -1.52
PMS1-203ENST00000409593 PRR5-ARHGAP8B1AHC4 643 aa5.57□□□□□ -1.52
PMS1-203ENST00000409593 NPIPB8E9PQR5 432 aa5.57□□□□□ -1.52
PMS1-203ENST00000409593 FAM20BO75063 409 aa5.57□□□□□ -1.52
PMS1-203ENST00000409593 FSHBP01225 129 aa5.57□□□□□ -1.52
PMS1-203ENST00000409593 AGXTP21549 392 aa5.57□□□□□ -1.52
PMS1-203ENST00000409593 SYDE2Q5VT97 1194 aa5.57□□□□□ -1.52
PMS1-203ENST00000409593 PPM1NQ8N819 430 aa5.57□□□□□ -1.52
PMS1-203ENST00000409593 ZCRB1Q8TBF4 217 aaKnown RBP5.57□□□□□ -1.52
PMS1-203ENST00000409593 CACTINQ8WUQ7 758 aaKnown RBP5.57□□□□□ -1.52
PMS1-203ENST00000409593 CCDC8Q9H0W5 538 aaPredicted RBP5.57□□□□□ -1.52
PMS1-203ENST00000409593 CEP72Q9P209 647 aa5.57□□□□□ -1.52
PMS1-203ENST00000409593 SCOCQ9UIL1 159 aa5.57□□□□□ -1.52
PMS1-203ENST00000409593 ANKRD62A6NC57 917 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 XPOTO43592 962 aaKnown RBP5.56□□□□□ -1.52
PMS1-203ENST00000409593 GSPT1P15170 499 aaKnown RBP5.56□□□□□ -1.52
PMS1-203ENST00000409593 TUBA3CQ13748 450 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 TUBA3EQ6PEY2 450 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 Q6ZVL8 140 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 DOK3Q7L591 496 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 TRMT2AQ8IZ69 625 aaKnown RBP5.56□□□□□ -1.52
PMS1-203ENST00000409593 Q8N1X5 172 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 CBARPQ8N350 705 aaPredicted RBP5.56□□□□□ -1.52
PMS1-203ENST00000409593 OR7D4Q8NG98 312 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 OR52N2Q8NGI0 321 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 CEP95Q96GE4 821 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 SMAD5Q99717 465 aaKnown RBP5.56□□□□□ -1.52
PMS1-203ENST00000409593 PDCD2LQ9BRP1 358 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 TMPRSS5Q9H3S3 457 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 SORCS3Q9UPU3 1222 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 REXO2Q9Y3B8 237 aaKnown RBP5.56□□□□□ -1.52
PMS1-203ENST00000409593 XDHP47989 1333 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 B5MCH6 92 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 ALG1L2C9J202 215 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 ZNF202O95125 648 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 MCAMP43121 646 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 PPP3CAQ08209 521 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 VPS72Q15906 364 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 MFSD14BQ5SR56 506 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 GJC2Q5T442 439 aaPredicted RBP5.56□□□□□ -1.52
PMS1-203ENST00000409593 ANKS6Q68DC2 871 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 HTR3DQ70Z44 454 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 PQLC1Q8N2U9 271 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 RNF169Q8NCN4 708 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 C1orf162Q8NEQ5 155 aaPredicted RBP5.56□□□□□ -1.52
PMS1-203ENST00000409593 FAM193BQ96PV7 902 aaPredicted RBP5.56□□□□□ -1.52
PMS1-203ENST00000409593 SENP6Q9GZR1 1112 aaPredicted RBP5.56□□□□□ -1.52
PMS1-203ENST00000409593 BCO1Q9HAY6 547 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 EIF2B4Q9UI10 523 aaKnown RBP5.56□□□□□ -1.52
PMS1-203ENST00000409593 HS3ST3A1Q9Y663 406 aa5.56□□□□□ -1.52
PMS1-203ENST00000409593 TRIM75PA6NK02 468 aa5.55□□□□□ -1.52
PMS1-203ENST00000409593 FZD7O75084 574 aa5.55□□□□□ -1.52
PMS1-203ENST00000409593 GDF5P43026 501 aa5.55□□□□□ -1.52
PMS1-203ENST00000409593 FLT3LGP49771 235 aa5.55□□□□□ -1.52
PMS1-203ENST00000409593 TOB2Q14106 344 aaPredicted RBP5.55□□□□□ -1.52
PMS1-203ENST00000409593 PTPROQ16827 1216 aa5.55□□□□□ -1.52
PMS1-203ENST00000409593 RABL3Q5HYI8 236 aa5.55□□□□□ -1.52
PMS1-203ENST00000409593 USP51Q70EK9 711 aa5.55□□□□□ -1.52
PMS1-203ENST00000409593 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.55□□□□□ -1.52
PMS1-203ENST00000409593 TFAP2CQ92754 450 aa5.55□□□□□ -1.52
PMS1-203ENST00000409593 LDAHQ9H6V9 325 aa5.55□□□□□ -1.52
PMS1-203ENST00000409593 ZNF703Q9H7S9 590 aaPredicted RBP5.55□□□□□ -1.52
PMS1-203ENST00000409593 ZNF277Q9NRM2 450 aaPredicted RBP5.55□□□□□ -1.52
PMS1-203ENST00000409593 LANCL2Q9NS86 450 aa5.55□□□□□ -1.52
PMS1-203ENST00000409593 RPS6KA4O75676 772 aa5.54□□□□□ -1.52
PMS1-203ENST00000409593 ENDOD1O94919 500 aa5.54□□□□□ -1.52
PMS1-203ENST00000409593 SCAF4O95104 1147 aaKnown RBP5.54□□□□□ -1.52
PMS1-203ENST00000409593 RAP2AP10114 183 aa5.54□□□□□ -1.52
PMS1-203ENST00000409593 IBSPP21815 317 aaPredicted RBP5.54□□□□□ -1.52
PMS1-203ENST00000409593 INAVAQ3KP66 663 aa5.54□□□□□ -1.52
PMS1-203ENST00000409593 NAIF1Q69YI7 327 aaPredicted RBP5.54□□□□□ -1.52
PMS1-203ENST00000409593 FAM177A1Q8N128 213 aaPredicted RBP5.54□□□□□ -1.52
PMS1-203ENST00000409593 CPT1CQ8TCG5 803 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms