RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 VPS18Q9P253 973 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 IP6K2Q9UHH9 426 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 PHLPP1O60346 1717 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 SLC15A5A6NIM6 579 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 MYBP10242 640 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 MBL2P11226 248 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 TCP1P17987 556 aaKnown RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 ZNF131P52739 623 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 FBXW4P57775 412 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 TFDP2Q14188 446 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 SGSM1Q2NKQ1 1148 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 WDR72Q3MJ13 1102 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 SYTL3Q4VX76 610 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 C10orf120Q5SQS8 335 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 DACT2Q5SW24 774 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 FAM102AQ5T9C2 384 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 LMBRD2Q68DH5 695 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 ARMC6Q6NXE6 501 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 CSGALNACT1Q8TDX6 532 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 SCFD1Q8WVM8 642 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 RBM41Q96IZ5 413 aaKnown RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 MAP3K14Q99558 947 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 EPAS1Q99814 870 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 EDEM3Q9BZQ6 932 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 FBXO28Q9NVF7 368 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 EPN1Q9Y6I3 576 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 RGS16O15492 202 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 SNX2O60749 519 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 RNASEH1O60930 286 aaKnown RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 XYLBO75191 536 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 CLTAP09496 248 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 ACADMP11310 421 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 CKBP12277 381 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 GTF2F1P35269 517 aaKnown RBP eCLIP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 CTXN3Q4LDR2 81 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 TRIM72Q6ZMU5 477 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 RHOT2Q8IXI1 618 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 SRRM1Q8IYB3 904 aaKnown RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 ANKRD42Q8N9B4 389 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 UPF1Q92900 1129 aaKnown RBP eCLIP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 STMN2Q93045 179 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 CAPNS2Q96L46 248 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 KLK14Q9P0G3 267 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 CNOT8Q9UFF9 292 aaKnown RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 DSEQ9UL01 958 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 ITM2BQ9Y287 266 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 TTLL13PA6NNM8 815 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 RSPH10B2B2RC85 870 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 E5RI56 91 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 SLC16A3O15427 465 aaKnown RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 ALDH2P05091 517 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 RSPH10BP0C881 870 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 GNL1P36915 607 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 CASP2P42575 452 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 ACOT2P49753 483 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 AP1B1Q10567 949 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 ARHGEF7Q14155 803 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 TMTC4Q5T4D3 741 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 PCNX4Q63HM2 1172 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 NFRKBQ6P4R8 1299 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 FBXL13Q8NEE6 735 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 SNX19Q92543 992 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 MAGOHBQ96A72 148 aaKnown RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 GMCL1Q96IK5 515 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 APBA2Q99767 749 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 DESI2Q9BSY9 194 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 EPB41L4AQ9HCS5 686 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 ABI2Q9NYB9 513 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-203ENST00000409101 CEP72Q9P209 647 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 MAD2L2Q9UI95 211 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 RCOR1Q9UKL0 485 aa5.34□□□□□ -1.55
SCN3A-203ENST00000409101 TROVE2P10155 538 aaKnown RBP eCLIP5.34□□□□□ -1.56
SCN3A-203ENST00000409101 DNAJB2P25686 324 aa5.34□□□□□ -1.56
SCN3A-203ENST00000409101 NMT1P30419 496 aaKnown RBP5.34□□□□□ -1.56
SCN3A-203ENST00000409101 PSEN2P49810 448 aa5.34□□□□□ -1.56
SCN3A-203ENST00000409101 SLC26A2P50443 739 aa5.34□□□□□ -1.56
SCN3A-203ENST00000409101 HSD17B4P51659 736 aa5.34□□□□□ -1.56
SCN3A-203ENST00000409101 GUCY2FP51841 1108 aa5.34□□□□□ -1.56
SCN3A-203ENST00000409101 TPI1P60174 286 aa5.34□□□□□ -1.56
SCN3A-203ENST00000409101 TAP1Q03518 808 aa5.34□□□□□ -1.56
SCN3A-203ENST00000409101 ELAVL2Q12926 359 aaKnown RBP5.34□□□□□ -1.56
SCN3A-203ENST00000409101 GRIK4Q16099 956 aa5.34□□□□□ -1.56
SCN3A-203ENST00000409101 CDC26Q8NHZ8 85 aa5.34□□□□□ -1.56
SCN3A-203ENST00000409101 RMDN1Q96DB5 314 aa5.34□□□□□ -1.56
SCN3A-203ENST00000409101 C11orf70Q9BRQ4 267 aa5.34□□□□□ -1.56
SCN3A-203ENST00000409101 ABHD16BQ9H3Z7 469 aa5.34□□□□□ -1.56
SCN3A-203ENST00000409101 FZD1Q9UP38 647 aa5.34□□□□□ -1.56
SCN3A-203ENST00000409101 IGSF9BQ9UPX0 1349 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 VWA5AO00534 786 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 EXTL3O43909 919 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 VTNP04004 478 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 CTNNA1P35221 906 aaKnown RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 IFNAR2P48551 515 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 RWDD2BP57060 319 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 STX1BP61266 288 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 IL31Q6EBC2 164 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 CYP4F22Q6NT55 531 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 C3orf67Q6ZVT6 689 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 CD302Q8IX05 232 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 MGARPQ8TDB4 240 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms