RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 MLH1P40692 756 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 SLC11A1P49279 550 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 STRN3Q13033 797 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 PTPN14Q15678 1187 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 KYAT1Q16773 422 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 PTPN21Q16825 1174 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 CMASQ8NFW8 434 aaPredicted RBP14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 NXPE3Q969Y0 559 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 FBXL18Q96ME1 805 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 CCDC94Q9BW85 323 aaPredicted RBP14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 MINDY3Q9H8M7 445 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 SLC38A7Q9NVC3 462 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 SMC3Q9UQE7 1217 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 EYSQ5T1H1 3165 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 PLXNA4Q9HCM2 1894 aa14.18□□□□□ -0.14
SNORD88B-201ENST00000408454 PRUNE2Q8WUY3 3088 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 SPATA31C1P0DKV0 1188 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 ZXDAP98168 799 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 DSC1Q08554 894 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 TUSC3Q13454 348 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 UBXN11Q5T124 520 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 TRIM67Q6ZTA4 783 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 BRAPQ7Z569 592 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 ZDHHC14Q8IZN3 488 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 IGSF22Q8N9C0 903 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 ZNF579Q8NAF0 562 aaKnown RBP14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 VN1R2Q8NFZ6 395 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 GAD1Q99259 594 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 APOL6Q9BWW8 343 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 S1PR5Q9H228 398 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 BHMT2Q9H2M3 363 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 FZD8Q9H461 694 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 CD320Q9NPF0 282 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 TSHZ2Q9NRE2 1034 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 ZDHHC7Q9NXF8 308 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 FNIP2Q9P278 1114 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 MUTYHQ9UIF7 546 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 ADAM28Q9UKQ2 775 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 ZFP37Q9Y6Q3 630 aaPredicted RBP14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 BDP1A6H8Y1 2624 aa14.17□□□□□ -0.14
SNORD88B-201ENST00000408454 ARID2Q68CP9 1835 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 NPTXRO95502 500 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 PDIA4P13667 645 aaKnown RBP14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 PTGDRQ13258 359 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 LONRF3Q496Y0 759 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 LIN9Q5TKA1 542 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 POTEGQ6S5H5 508 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 COLGALT2Q8IYK4 626 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 SMG8Q8ND04 991 aaKnown RBP14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 RASSF8Q8NHQ8 419 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 ASAP3Q8TDY4 903 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 PBXIP1Q96AQ6 731 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 CALML4Q96GE6 196 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 DDX27Q96GQ7 796 aaKnown RBP14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 CPB2Q96IY4 423 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 MRPL4Q9BYD3 311 aaKnown RBP14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 TMEM60Q9H2L4 133 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 LARSQ9P2J5 1176 aaKnown RBP14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 HCSTQ9UBK5 93 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 DNAJB4Q9UDY4 337 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 KIAA1024Q9UPX6 916 aa14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 PRG3Q9Y2Y8 225 aaPredicted RBP14.16□□□□□ -0.14
SNORD88B-201ENST00000408454 BRWD1Q9NSI6 2320 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 TMEM221A6NGB7 291 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 M0R296 226 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 XPOTO43592 962 aaKnown RBP14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 MED24O75448 989 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 SCNN1GP51170 649 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 PTPN5P54829 565 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 DSG1Q02413 1049 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 HSP90AA2PQ14568 343 aaPredicted RBP14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 RARS2Q5T160 578 aaKnown RBP14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 FUT10Q6P4F1 479 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 SYCE2Q6PIF2 218 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 MAEAQ7L5Y9 396 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 GPR149Q86SP6 731 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 ZNF280BQ86YH2 543 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 FBXL6Q8N531 539 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 KLHL5Q96PQ7 755 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 TMEM134Q9H6X4 195 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 PIDD1Q9HB75 910 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 KMT5AQ9NQR1 393 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 DDX19AQ9NUU7 478 aaKnown RBP14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 IGSF9Q9P2J2 1179 aa14.15□□□□□ -0.14
SNORD88B-201ENST00000408454 ARHGEF37A1IGU5 675 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 FAM86C2PA6NEL3 165 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 CCDC169A6NNP5 214 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 ZBTB39O15060 712 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 DDHD2O94830 711 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 PAX3P23760 479 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 TXLNAP40222 546 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 CLCN4P51793 760 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 AMHR2Q16671 573 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 ATF7IP2Q5U623 682 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 TSPAN18Q96SJ8 248 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 TCHPQ9BT92 498 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 EIF2AQ9BY44 585 aaKnown RBP14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 MFSD1Q9H3U5 465 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 NXF3Q9H4D5 531 aaKnown RBP14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 RXFP1Q9HBX9 757 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms