RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 LOC730098B7Z3J9 87 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 NRP1O14786 923 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 CLASP2O75122 1294 aaKnown RBP10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 C1RP00736 705 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 GLUD2P49448 558 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 TOB1P50616 345 aaPredicted RBP10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 SCNN1GP51170 649 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 SMTNP53814 917 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 DSC1Q08554 894 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 ELAVL2Q12926 359 aaKnown RBP10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 NBR1Q14596 966 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 PTPN14Q15678 1187 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 HERC4Q5GLZ8 1057 aaPredicted RBP10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 LLGL2Q6P1M3 1020 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 PDXDC1Q6P996 788 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 ZNF280BQ86YH2 543 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 COLGALT2Q8IYK4 626 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 SUSD6Q92537 303 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 NXF3Q9H4D5 531 aaKnown RBP10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 EPHX3Q9H6B9 360 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 SFXN1Q9H9B4 322 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 CD320Q9NPF0 282 aa10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 TOPORSQ9NS56 1045 aaPredicted RBP10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 PRG3Q9Y2Y8 225 aaPredicted RBP10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 ARIH1Q9Y4X5 557 aaPredicted RBP10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.01□□□□□ -0.81
SNORD88A-201ENST00000408314 CCDC169A6NNP5 214 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 K7ERI5 159 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 B4GALT5O43286 388 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 DDHD2O94830 711 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 LIG1P18858 919 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 GUCY2CP25092 1073 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 KLRC2P26717 231 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 ABCD1P33897 745 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 UBA7P41226 1012 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 YARSP54577 528 aaKnown RBP10□□□□□ -0.81
SNORD88A-201ENST00000408314 STRN3Q13033 797 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 TUSC3Q13454 348 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 USP41Q3LFD5 358 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 ATAT1Q5SQI0 421 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 HYIQ5T013 277 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 CYP26C1Q6V0L0 522 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 CABP7Q86V35 215 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 TMEM173Q86WV6 379 aaPredicted RBP10□□□□□ -0.81
SNORD88A-201ENST00000408314 RNF135Q8IUD6 432 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 VN1R2Q8NFZ6 395 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 RASSF8Q8NHQ8 419 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 CALML4Q96GE6 196 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 ZFP42Q96MM3 310 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 LRFN3Q9BTN0 628 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 CCDC94Q9BW85 323 aaPredicted RBP10□□□□□ -0.81
SNORD88A-201ENST00000408314 MRPL4Q9BYD3 311 aaKnown RBP10□□□□□ -0.81
SNORD88A-201ENST00000408314 CCDC113Q9H0I3 377 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 ADAM7Q9H2U9 754 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 PDZD7Q9H5P4 517 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 TMEM134Q9H6X4 195 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 KMT5AQ9NQR1 393 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 HES2Q9Y543 173 aa10□□□□□ -0.81
SNORD88A-201ENST00000408314 SF3B1O75533 1304 aaKnown RBP eCLIP10□□□□□ -0.81
SNORD88A-201ENST00000408314 TDRD15B5MCY1 1934 aaKnown RBP9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 A0A087WWV3 80 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 VWA3AA6NCI4 1184 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 GLUD1P00367 558 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 SSBP05455 408 aaKnown RBP eCLIP9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 THP07101 528 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 AKAP5P24588 427 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 LONP1P36776 959 aaKnown RBP9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 PEX3P56589 373 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 HSP90AA2PQ14568 343 aaPredicted RBP9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 ZRSR1Q15695 479 aaKnown RBP9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 ATF7IP2Q5U623 682 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 SYCE2Q6PIF2 218 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 PLCD3Q8N3E9 789 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 HDAC7Q8WUI4 952 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 BCL7CQ8WUZ0 217 aaPredicted RBP9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 SPIRE2Q8WWL2 714 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 BSNDQ8WZ55 320 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 RPGRIP1Q96KN7 1286 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 FBXL18Q96ME1 805 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 UROC1Q96N76 676 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 S1PR5Q9H228 398 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 RNF39Q9H2S5 420 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 SLC38A7Q9NVC3 462 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 LARSQ9P2J5 1176 aaKnown RBP9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 ADAM28Q9UKQ2 775 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 TNFSF13BQ9Y275 285 aa9.99□□□□□ -0.81
SNORD88A-201ENST00000408314 VPS37CA5D8V6 355 aaPredicted RBP9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 E9PMD0 336 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 TRAPPC3O43617 180 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 HIP1RO75146 1068 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 TADA2AO75478 443 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 RECQL4O94761 1208 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 CD2BP2O95400 341 aaKnown RBP9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 PDIA4P13667 645 aaKnown RBP9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 TXLNAP40222 546 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 NPTX2P47972 431 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 AFF1P51825 1210 aaKnown RBP9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 DSG1Q02413 1049 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 CUL4AQ13619 759 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 ECM1Q16610 540 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms