RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 PNKPQ96T60 521 aa26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 RAB20Q9NX57 234 aa26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 PAFAH1B1P43034 410 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 GALCP54803 685 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 MKRN3Q13064 507 aaKnown RBP26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 CAPSQ13938 189 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 SV2AQ7L0J3 742 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 TRIM50Q86XT4 487 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 SCFD2Q8WU76 684 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 LMBR1Q8WVP7 490 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 TCP11Q8WWU5 503 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 PRPF31Q8WWY3 499 aaKnown RBP26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 PSPC1Q8WXF1 523 aaKnown RBP26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 COPS5Q92905 334 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 BTBD19C9JJ37 291 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 ADCY3O60266 1144 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 SEC31AO94979 1220 aaKnown RBP26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 ZRANB2O95218 330 aaKnown RBP eCLIP26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 ZNF572Q7Z3I7 529 aaPredicted RBP26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 TAS1R2Q8TE23 839 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 KAT5Q92993 513 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 FNBP1Q96RU3 617 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 TARS2Q9BW92 718 aaKnown RBP26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 PDGFCQ9NRA1 345 aa26.66■■□□□ 1.86
DNMT3A-206ENST00000406659 TMCO5BA8MYB1 307 aa26.65■■□□□ 1.86
DNMT3A-206ENST00000406659 GAS2O43903 313 aaKnown RBP26.65■■□□□ 1.86
DNMT3A-206ENST00000406659 ERLIN1O75477 346 aa26.65■■□□□ 1.86
DNMT3A-206ENST00000406659 LDHAP00338 332 aaKnown RBP26.65■■□□□ 1.86
DNMT3A-206ENST00000406659 PSMD6Q15008 389 aa26.65■■□□□ 1.86
DNMT3A-206ENST00000406659 PLCB4Q15147 1175 aa26.65■■□□□ 1.86
DNMT3A-206ENST00000406659 ARMCX2Q7L311 632 aa26.65■■□□□ 1.86
DNMT3A-206ENST00000406659 SMARCAD1Q9H4L7 1026 aa26.65■■□□□ 1.86
DNMT3A-206ENST00000406659 SUGCTQ9HAC7 445 aa26.65■■□□□ 1.86
DNMT3A-206ENST00000406659 DIS3Q9Y2L1 958 aaKnown RBP26.65■■□□□ 1.86
DNMT3A-206ENST00000406659 MCM3APO60318 1980 aa26.65■■□□□ 1.86
DNMT3A-206ENST00000406659 EFNA5P52803 228 aa26.64■■□□□ 1.86
DNMT3A-206ENST00000406659 FKBP1BP68106 108 aa26.64■■□□□ 1.86
DNMT3A-206ENST00000406659 FAM71AQ8IYT1 594 aa26.64■■□□□ 1.86
DNMT3A-206ENST00000406659 ZBTB45Q96K62 511 aaPredicted RBP26.64■■□□□ 1.86
DNMT3A-206ENST00000406659 KREMEN1Q96MU8 473 aa26.64■■□□□ 1.86
DNMT3A-206ENST00000406659 MSTO1Q9BUK6 570 aa26.64■■□□□ 1.86
DNMT3A-206ENST00000406659 RNF14Q9UBS8 474 aa26.64■■□□□ 1.86
DNMT3A-206ENST00000406659 ATP8B1O43520 1251 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 TMEM253P0C7T8 217 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 GCLCP48506 637 aaPredicted RBP26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 SLC26A2P50443 739 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 NLRP11P59045 1033 aaKnown RBP26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 ITIH3Q06033 890 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 C2orf54Q08AI8 447 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 DRP2Q13474 957 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 ZNF792Q3KQV3 632 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 ANKRD23Q86SG2 305 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 TPCN2Q8NHX9 752 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 SLC20A1Q8WUM9 679 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 CTNNBL1Q8WYA6 563 aaPredicted RBP26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 TAF4BQ92750 862 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 GBA2Q9HCG7 927 aaPredicted RBP26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 ANKFY1Q9P2R3 1169 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 SIP14410 1827 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 ADORA2AP29274 412 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 ACOT2P49753 483 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 MXD4Q14582 209 aaPredicted RBP26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 CCDC70Q6NSX1 233 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 HELQQ8TDG4 1101 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 BRI3BPQ8WY22 251 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 SHC3Q92529 594 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 JPH2Q9BR39 696 aaPredicted RBP26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 TRPC6Q9Y210 931 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 IVNS1ABPQ9Y6Y0 642 aa26.63■■□□□ 1.85
DNMT3A-206ENST00000406659 TNNI1P19237 187 aa26.62■■□□□ 1.85
DNMT3A-206ENST00000406659 CBX1P83916 185 aa26.62■■□□□ 1.85
DNMT3A-206ENST00000406659 RPS6KA1Q15418 735 aa26.62■■□□□ 1.85
DNMT3A-206ENST00000406659 CFAP221Q4G0U5 840 aa26.62■■□□□ 1.85
DNMT3A-206ENST00000406659 RPUSD2Q8IZ73 545 aaKnown RBP26.62■■□□□ 1.85
DNMT3A-206ENST00000406659 HNRNPLLQ8WVV9 542 aaKnown RBP26.62■■□□□ 1.85
DNMT3A-206ENST00000406659 HAPLN2Q9GZV7 340 aa26.62■■□□□ 1.85
DNMT3A-206ENST00000406659 RNF216Q9NWF9 866 aaPredicted RBP26.62■■□□□ 1.85
DNMT3A-206ENST00000406659 NCANO14594 1321 aa26.62■■□□□ 1.85
DNMT3A-206ENST00000406659 A0A0B4J269 797 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 SGPL1O95470 568 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 MCM3P25205 808 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 DNA2P51530 1060 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 VSNL1P62760 191 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 CLDN10P78369 228 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 LAMTOR4Q0VGL1 99 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 PRPF4BQ13523 1007 aaKnown RBP26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 MMGT1Q8N4V1 131 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 C2orf69Q8N8R5 385 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 LRRC57Q8N9N7 239 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 SPATA4Q8NEY3 305 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 ZNF516Q92618 1163 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 TARSL2A2RTX5 802 aaKnown RBP26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 ZBTB42B2RXF5 422 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 STRNO43815 780 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 ZC3H11AO75152 810 aaKnown RBP eCLIP26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 SRGAP2CP0DJJ0 459 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 TMEM63BQ5T3F8 832 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 WDR93Q6P2C0 686 aa26.61■■□□□ 1.85
DNMT3A-206ENST00000406659 CRELD2Q6UXH1 353 aaPredicted RBP26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms