RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 SEL1LQ9UBV2 794 aa16.01■□□□□ 0.15
CDPF1-203ENST00000404583 TBX20Q9UMR3 447 aa16.01■□□□□ 0.15
CDPF1-203ENST00000404583 TDRD15B5MCY1 1934 aaKnown RBP16■□□□□ 0.15
CDPF1-203ENST00000404583 CUL9Q8IWT3 2517 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 ASIC1P78348 528 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 GTF2BQ00403 316 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 COASYQ13057 564 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 CUL4BQ13620 913 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 ADGRE1Q14246 886 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 NOMO2Q5JPE7 1267 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 ZBTB33Q86T24 672 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 CCDC65Q8IXS2 484 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 PAGE5Q96GU1 130 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 GAS2L1Q99501 681 aaPredicted RBP16■□□□□ 0.15
CDPF1-203ENST00000404583 UBN1Q9NPG3 1134 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 SNTG2Q9NY99 539 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 PARP2Q9UGN5 583 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 USP25Q9UHP3 1055 aa16■□□□□ 0.15
CDPF1-203ENST00000404583 TRANK1O15050 2925 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 COL4A4P53420 1690 aaPredicted RBP15.99■□□□□ 0.15
CDPF1-203ENST00000404583 ABLIM1O14639 778 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 ZNF202O95125 648 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 IGFBP4P22692 258 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 PROZP22891 400 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 DCAF4L1Q3SXM0 396 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 ZNF568Q3ZCX4 644 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 CNNM4Q6P4Q7 775 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 MPZL3Q6UWV2 235 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 HACE1Q8IYU2 909 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 LRRC43Q8N309 656 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 HPS3Q969F9 1004 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 BICD1Q96G01 975 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 ZFP42Q96MM3 310 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 GAD1Q99259 594 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 TCHPQ9BT92 498 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 MRPL9Q9BYD2 267 aaKnown RBP15.99■□□□□ 0.15
CDPF1-203ENST00000404583 CDT1Q9H211 546 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 ST6GALNAC4Q9H4F1 302 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 TBC1D13Q9NVG8 400 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 MIOSQ9NXC5 875 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 KLK14Q9P0G3 267 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 GIT1Q9Y2X7 761 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 RWDD3Q9Y3V2 267 aa15.99■□□□□ 0.15
CDPF1-203ENST00000404583 SPTBN5Q9NRC6 3674 aaKnown RBP15.99■□□□□ 0.15
CDPF1-203ENST00000404583 ARL5CA6NH57 179 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 C5orf67F2Z3F1 127 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 H3BNC9 293 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 LPXNO60711 386 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 TOM1L1O75674 476 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 GCNT3O95395 438 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 POMCP01189 267 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 RB1P06400 928 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 MYBP10242 640 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 SCP2P22307 547 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 MLH1P40692 756 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 CASP5P51878 434 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 GPM6BQ13491 265 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 ZPBP2Q6X784 338 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 CEP120Q8N960 986 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 COLGALT1Q8NBJ5 622 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 URGCPQ8TCY9 931 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 STRA6Q9BX79 667 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 COL25A1Q9BXS0 654 aaPredicted RBP15.98■□□□□ 0.15
CDPF1-203ENST00000404583 FGFBP2Q9BYJ0 223 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 OLFML3Q9NRN5 406 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 ANKFY1Q9P2R3 1169 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 GDAQ9Y2T3 454 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 PLXNA4Q9HCM2 1894 aa15.98■□□□□ 0.15
CDPF1-203ENST00000404583 PRRC2BQ5JSZ5 2229 aaKnown RBP15.98■□□□□ 0.15
CDPF1-203ENST00000404583 CITO14578 2027 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 HNRNPDLO14979 420 aaKnown RBP15.97■□□□□ 0.15
CDPF1-203ENST00000404583 PPP1R37O75864 691 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 HARSP12081 509 aaKnown RBP15.97■□□□□ 0.15
CDPF1-203ENST00000404583 ABCD1P33897 745 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 PBX3P40426 434 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 MATR3P43243 847 aaKnown RBP eCLIP15.97■□□□□ 0.15
CDPF1-203ENST00000404583 LIG4P49917 911 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 OSTNP61366 133 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 RNASELQ05823 741 aaKnown RBP15.97■□□□□ 0.15
CDPF1-203ENST00000404583 KCNA1Q09470 495 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 CSPP1Q1MSJ5 1256 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 UNC13DQ70J99 1090 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 APBB1IPQ7Z5R6 666 aaPredicted RBP15.97■□□□□ 0.15
CDPF1-203ENST00000404583 ZNF280BQ86YH2 543 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 MAP4K3Q8IVH8 894 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 FMR1NBQ8N0W7 255 aaPredicted RBP15.97■□□□□ 0.15
CDPF1-203ENST00000404583 KLHL23Q8NBE8 558 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 RSPH1Q8WYR4 309 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 PLVAPQ9BX97 442 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 HAPLN2Q9GZV7 340 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 GBP3Q9H0R5 595 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 CXCL16Q9H2A7 254 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 IKZF4Q9H2S9 585 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 NRDE2Q9H7Z3 1164 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 AAASQ9NRG9 546 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 PCDHB12Q9Y5F1 795 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 MYO7AQ13402 2215 aa15.97■□□□□ 0.15
CDPF1-203ENST00000404583 ANKRD63C9JTQ0 380 aa15.96■□□□□ 0.15
CDPF1-203ENST00000404583 CLDN3O15551 220 aa15.96■□□□□ 0.15
CDPF1-203ENST00000404583 ZC3H11AO75152 810 aaKnown RBP eCLIP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms