RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 OLFML3Q9NRN5 406 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 BRPF3Q9ULD4 1205 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 PCDHB6Q9Y5E3 794 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 RICTORQ6R327 1708 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 TBKBP1A7MCY6 615 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 VCLP18206 1134 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 TAF6P49848 677 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 PSMC1P62191 440 aaKnown RBP8.46□□□□□ -1.06
USP47-203ENST00000399455 PPP6R3Q5H9R7 873 aaPredicted RBP8.46□□□□□ -1.06
USP47-203ENST00000399455 IRAK1BP1Q5VVH5 260 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 PSMB7Q99436 277 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 MAP3K14Q99558 947 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 RIT2Q99578 217 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 ZBTB18Q99592 522 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 CATSPERBQ9H7T0 1116 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 POTEFA5A3E0 1075 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 MYO1DO94832 1006 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 KRT7P08729 469 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 POTEIP0CG38 1075 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 CASP2P42575 452 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 MSH2P43246 934 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 HERVK_113P62684 666 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 NAALADL2Q58DX5 795 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 POTEGQ6S5H5 508 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 POTEEQ6S8J3 1075 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 TMEM143Q96AN5 459 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 FAF2Q96CS3 445 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 IGFLR1Q9H665 355 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 HAUS4Q9H6D7 363 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 PTPN22Q9Y2R2 807 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 STX2P32856 288 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 CYP2C19P33261 490 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 TAB3Q8N5C8 712 aaPredicted RBP8.46□□□□□ -1.06
USP47-203ENST00000399455 ATP6V0D2Q8N8Y2 350 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 USP13Q92995 863 aaPredicted RBP8.46□□□□□ -1.06
USP47-203ENST00000399455 PPP1R12CQ9BZL4 782 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 SPATC1LQ9H0A9 340 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 VCX3BQ9H321 246 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 ANKEF1Q9NU02 776 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 USH1CQ9Y6N9 552 aa8.46□□□□□ -1.06
USP47-203ENST00000399455 REREQ9P2R6 1566 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 PRPF4O43172 522 aaKnown RBP eCLIP8.45□□□□□ -1.06
USP47-203ENST00000399455 SLC2A3P11169 496 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 SLC11A2P49281 568 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 VPS41P49754 854 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 TPI1P60174 286 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 IRX4P78413 519 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 CACNB2Q08289 660 aaPredicted RBP8.45□□□□□ -1.06
USP47-203ENST00000399455 SGSM1Q2NKQ1 1148 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 ZNF394Q53GI3 561 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 TMC7Q7Z402 723 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 RSPH10B2B2RC85 870 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 ALDH2P05091 517 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 CLTAP09496 248 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 RSPH10BP0C881 870 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 ADKP55263 362 aaKnown RBP8.45□□□□□ -1.06
USP47-203ENST00000399455 YWHAHQ04917 246 aaPredicted RBP8.45□□□□□ -1.06
USP47-203ENST00000399455 STARD3Q14849 445 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 PHKG1Q16816 387 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 PRMT6Q96LA8 375 aaPredicted RBP8.45□□□□□ -1.06
USP47-203ENST00000399455 NFU1Q9UMS0 254 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 UBQLN1Q9UMX0 589 aaKnown RBP8.45□□□□□ -1.06
USP47-203ENST00000399455 SNAP23O00161 211 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 ZC3H11AO75152 810 aaKnown RBP eCLIP8.45□□□□□ -1.067e-6■■■■■ 33.7
USP47-203ENST00000399455 ADCK5Q3MIX3 580 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 NBPF12Q5TAG4 269 aaPredicted RBP8.45□□□□□ -1.06
USP47-203ENST00000399455 LRGUKQ96M69 825 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 IGSF9BQ9UPX0 1349 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 SLC16A3O15427 465 aaKnown RBP8.45□□□□□ -1.06
USP47-203ENST00000399455 BRD1O95696 1058 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 APLP1P51693 650 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 PPP4CP60510 307 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 NBPF9Q3BBW0 867 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 PPM1LQ5SGD2 360 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 SLC7A14Q8TBB6 771 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 RMDN1Q96DB5 314 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 GPRC5DQ9NZD1 345 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 E9PMD0 336 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 TTC4O95801 387 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 VCAM1P19320 739 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 PRMT2P55345 433 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 PDIA5Q14554 519 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 SPOPLQ6IQ16 392 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 TTC8Q8TAM2 541 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 RNF217Q8TC41 542 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 XPO4Q9C0E2 1151 aaKnown RBP8.45□□□□□ -1.06
USP47-203ENST00000399455 DNAJC12Q9UKB3 198 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 CCDC160A6NGH7 325 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 SRGAP2O75044 1071 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 MBL2P11226 248 aaPredicted RBP8.45□□□□□ -1.06
USP47-203ENST00000399455 IL1R1P14778 569 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 DSG3P32926 999 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 ATP6V1E1P36543 226 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 RASSF2P50749 326 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 MFSD10Q14728 455 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 SLC45A4Q5BKX6 768 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 C10orf120Q5SQS8 335 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 ZNF280DQ6N043 979 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 ATG9AQ7Z3C6 839 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 FBXO16Q8IX29 292 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms